Indonesian Biodiversity Information System, and Plant Resources of South East Asia

Transcription

1 Indonesian Biodiversity Information System, and Plant Resources of South East Asia Dedy Darnaedi, Ahmad J. Arief, Pesigrihasta Research Center for Biology, Indonesian Institute of Sciences (LIPI) Bogor, Indonesia Workshop on Biodiversity data Sharing Environment in Asia Chinese Academy of Sciences, Guangzhou, Guangdong Province, China March 7 th -9 th, 2013

2 Indo-Australian Archipelago Malay Archipelago Malesia Region South East Asia South East Asia

3 Natural Resources Richness Biogeography : located between two earth s biogeography region Indo- Malaya and Oceania Islands, 7.7 million m2 and 5.8 million m2 (marine and coastal) Enormous topography, 47 ecosystem types, Malesiana Cultural diversity More than 400 ethnic group, 665 different language and dialect Mega diversity and center of divers & high endemism : flowering plants ( spp.), insect ( spp.), mollusc ( spp.), fish (8.500 spp.), bird (1.500 spp.), mammal (500 spp.), reptile (2.000 spp.), mushroom ( spp), etc.

4 LOCAL PLANT SPECIES RICHNESS IN SOME LOCALITIES SPECIES RICHNESS & TREE DENSITY IN ONE HECTARE PLOTS WJ:Gede-Pangrango NP, Cibdas 2 (1600 m alt.) WJ: G Halimun NP, (G, Malang (1300 m alt.) WJ: G Halimun NP, G. Panenjoan (1100 m alt.) WJ: G Halimun NP, G. Kendang (1050 m alt) WJ G Halimun NP, Purwabakti: 2nd forest 900 m WJ: Gede-Pangrango NP, Bodogol (800 m alt.) NSL: Toraut (100 m alt) NSM: Batang Gadis NP.(660 m alt.) CSM: Bukit Tiga puluh NP (297 m alt. ) EK: Malinau (100 m alt.) Density (Trees/ha) Number of Species

5 1800 plots surveys on earth, Tesso Nilo the richest plant Relative biodiversity vascular on earth plant known species (2003) richness Number of species: Kilometers Mean Tesso Nilo with 218 species of flowering plants per 0.2 ha (LIPI WWF, 2004) Kilometers Kilometers W N E Batang Gadis with 225 species flowering plants per 0.2 ha (LIPI CI, 2005) S

6 RC. Biology-LIPI: National reference collections (Since 1817)

7 Exploration: documenting plant, animal and microbes (national program and international collaboration)

8 PLANT DIVERSITY ASSESSMENTS IN SE ASIA Aiming at editing AP Red List of vascular plants Recording all spp of vascular plants in 100m x 5m Yahara, T. et al

9 species richness vs altitude W Sumatra Mandor SW Cambodia N Thailand Taiwan Japan W Java Yahara, T. et al. 2011

10 RC. Biology-LIPI: National reference collections (Since 1817) Herbarium collections Zoological collections Microbial collections ± 2,000,000 sheets ± 2,500,000 samples ± 5,000 collections Living plant collection in 4 (20) Botanic Gardens ± 10,000 collections

11 Specimens records server through GBIF for the countries of South East Asia (as of 5 September 2011). Mostly based on duplicate collection in Europe and USA. Total record Georef.records Species Indonesia 458, ,845 51,911 Philippines 399, ,799 37,034 Malaysia 130,304 35,478 19,548 Thailand 149,358 36,743 16,463 Viet Nam 104,937 30,135 12,380 Singapore* 13,399 4,507 4,452 Brunei 6, ,746 *) RMBR, is the only Institution acting as a data provider to GBIF

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13 Biodiversity Information 1. Database System 2. Web 3. Multimedia 4. Biodiversity Informatics Research 5. Networks & Hardware

14 1. Database Systems There are two types of database system developed 1. Offline type by using License Software 2.Online type by using Open Source Software

15 Output

16 Specimens data recorded (2012) Groups Specimen Collection Data Offline type Online type Botany Zoology Mikrobiology 889, ,020 (42%) 12,530 2,991, ,509 (9%) (33%) 385

17 Database development Using Open Source Software for the purpose of: 1. Reconstruction Database System based on intranet 2. Database Services Application for end user 3. Development of mobile database for supporting field work activities 4. GIS application using Google Map facilities

18 2. WEB, on going activities 1. Improvement of Web Puslit Biologi 2.Updating data (scientist-public relations-it experts and art)

19 3. Multimedia 1. Two dimension digital photos, type specimens is priority ( for herbarium specimens, and zoological specimens) 2. Animasi Specimen 3D for education purpose 3. Profile of Botany, Zoology and Microbe Divisions

20 4. Biodiversity Informatics (BI) Biodiversity Informatics is the collection, communication, analysis and sharing of information about biodiversity Bioinformatics is concerned primarily with molecular biodiversity, and is a subset of biodiversity informatics. Plant Clasification (exersise) by using morphilogical characters and leaf venation. Plant genus Dillenia as a case study (Pesigrihasta, T. Triono & Aniati, 2012)

21 5. Network, InaBIF Study on Biodiversity Informatics based on Interoperability Data Prototipe Model

22 Networking System in RC Biology-LIPI (A prototype) Segmen 5-8 dan 13

23 (PROSEA) Plant Resources of South East Asia PROSEA is an international project focused on plant resources of South East Asia, inter disciplinary, covering the fields of agriculture, forestry, horticulture and botany. Documentation A documentation system has been developed for information storage and retrieval called SAPRIS (South East Asian Plant Resources Information System). It consists of 6 data bases:. BASELIST : Primarily a checklist of more than 6200 plant species. CATALOG : References to secondary literature. PREPHASE : References to literature from South East Asia. ORGANYM : References to institutions and their research activities. PERSONYM : References to specialist. TEXTFILE : All PROSEA publications and additional information.

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35 Thank you very much