Immunogenicity of Stem Cells in Therapeutic Applications. MDPB-Registry meeting nov 25th Stem cell immunogenicity in therapeutic applications

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Immunogenicity of Stem Cells in Therapeutic Applications MDPB-Registry meeting nov 25th 2016 Stem cell immunogenicity in therapeutic applications Has it been underestimated? Transplantation of any type of cell possibility of triggering an immune response unless: ABSOLUTELY identical in every respect, including epigenetics Predicting immunogenicity of a stem cell therapy is essential to enable safe and effective strategies to prevent immune attack 1

Immunogenicity of Stem Cells Differences in cell types Mechanisms of attack How to avoid immune attack (incl. MHC measures) 2016-nov-25 - Rode Kruis-Vlaanderen - Immunogenicity of stem cells Embryonic stem cells Most likely from an unrelated donor; may express mismatched MHC and/or minor (mih) they can trigger immune response 2

MHC (mih) expression of ESC Low expression Risk for attack by NK cells Absence of NK cells (rodent model) -> teratoma MHC Expression is expected to increase during differentiation Following cytokine release in case of immune response Nuclear transfer-derived embryonic stem cells (NT-ESC) Transplanting the nucleus of an autologous somatic cell in an enucleated oocyte Contains allogeneic mitochondria that are immunogenic mih 3

Induced Pluripotent stem cells (ipsc s) Are adult differentiated somatic cells that underwent nuclear reprogramming immunogenic? Can be autologous Undifferentiated ipsc s may express molecules from embryonic origin that may trigger immune response; fully differentiated autologous ipsc s are less immunogenic ipsc from autologous somatic cells should lack immunogenicity (auto immunity) The more differentiated, the less immunogenic Cave remaining embryonic molecules (incomplete differentiation of all cells in culture) The length of time cells remain in culture can Result in epigenetic changes Induce new molecules Immune senescence Should ipsc s be purified after culture to eliminate undifferentiated ESC s? 4

Type of cell, differentiated from autologous may affect potential immunogenicity in vivo Smooth muscle -> rejection Retinal pigmented epithelial cells -> not immunogenic? Dependent on many factors, including epigenetic abnormalities Intrinsic immune characteristics of different cell types Site implementation (Zhao T et al. Cell Stem cells (2015) 17, 353-359 Hematopoietic stem cells (HSC s) Are multipotent cells Chimerism Can be used to induce tolerance 5

Other aspects Blood group antigens are expressed Mölne et al (2008) Transplantation 86, 1407-1413 Absence of self tolerance to wild type functional gene Wang J et al (2008) Nat. Biotech. 26, 901-908 MSC s Najar M. et al. (2016) Cytotherapy. 18: 160-171 Jacobs S. et al. (2013)Immunology and Cell Biology 91, 32 39 Allo Immunity Trends in immunology, jan 2016, Vol. 37, No.1 6

Mechanisms of attack are T cells involved? Indirect route of antigen presentation Dominant pathway - mih antigens - Abnormally expressed molecules MHC mismatched stem cells Direct pathway if costimulatory molecules are expressed APC function molecules -> generally low expression both in ES & ipsc lines -> of marginal importance? Memory T cells!! require low levels of co stimulation only Mechanisms of attack Tissue Damage Tissue damage at moment of implementation Toll like receptors -> conflicting literature data Danger signals: DAMPS & PAMPS Impact? Site of implementation Amount of tissue disruption created by the procedure Whether antigens that can be recognised by the immune system are present 7

Mechanisms of attack Insulin producing cell clusters (IPCC s) Less immunogenic than allogeneic allografts Less DAMP expression (not tested - hypothesised) Less infiltration of immune cells (passenger lymphocytes, macrophages, ) Less to absence of direct presentation -> Even if innate reactivity triggered after transplantation, they were compromised in their ability to activate the adaptive immune system absence of co stimulatory factors Boyd, A.S. and Wood, K.J. (2010) PLoS ONE 5, e10501 Mechanisms of attack autologous derived dopamine neurons Disruption of the blood-brain barriers -> although good activity; insufficient data on the number of cells that survived the procedure -> early inflammatory response? -> injecting more cells than theoretically required? Hallet P. et al (2015) Cell Stem Cell 16, 269-274 8

Mechanisms of attack use of scaffolds Polymer & chemical scaffolds Decellularised organ scaffolds (e.g. Trachea) -> used for replacement therapy with structural purpose -> pose both advantage & create new targets for immune response Clinical impact currently not known. Controlling Stem Cell immunogenicity Immunomodulation Immunomonitoring Induction of Tolerance Immunogenetic selection / Stem cell banks / HLA matching 9

Controlling Stem cell immunogenicity Production of immunomodulatory molecules (role for MSC s?) Costimulation and accessory molecule blockade Combination of immunosuppressive drugs - risk benefit analysis - duration of required treatment Regulatory T cells Inducing immunological unresponsiveness Mixed chimerism? Conditioning? Tolerogenic DC s? Encapsulation Clinical grade GMP ips cell lines ( haplo banks) Mechanisms to overcome immunogenicity HLA matching - Requirements to be evaluated in view of immunogenicity - What level of HLA match is required? - Somatic cells don t express HLA-class II contrary to tissues and organs MHC expression knock out? NK cell attack -> ipsc haplobanks (e.g. homozygous for HLA-A B DR) 10

Mechanisms to overcome immunogenicity What is a reasonable HLA match? Mechanisms to overcome immunogenicity 150 cell lines to provide 20% of population with HLA match at 4 loci (HLA-A B C and DR) Taylor CJ et al. 2002 11

Mechanisms to overcome immunogenicity HLA matching ESC banks : reasonable HLA match 50 most frequent haplotypes could lead to a Zero Mismatch for HLA-A B DR for 60% of potential recipients. Bradley JA et al. Nat.Rev. Immunol (2002) 2(11): 589-871 As few as 10 cell lines homozygous for the most frequent haplotypes could provide a zero HLA mismatch for 38% of UK population. Taylor CJ et al. Lancet (2005) 366(9502): 2019-2025 Mechanisms to overcome immunogenicity HLA matching ESC banks reasonable HLA match 50 most frequent haplotypes could lead to a Zero Mismatch for HLA-A B DR for 60% of potential recipients. Bradley JA et al. Nat.Rev. Immunol (2002) 2(11): 589-871 As few as 10 cell lines homozygous for the most frequent haplotypes could provide a zeo HLA mismatch for 38% of UK population. Taylor CJ et al. Lancet (2005) 366(9502): 2019-2025 12

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Donor cell line selection HLA matching Reducing HLA mismatching - Pre transplant: screen for HLA antibodies & Identify specificity if present - Post transplant: continue monitoring (cfr organ transplantation) 15

Diabetes patients waiting for or transplanted with a (kidney) pancreas HLA antibodies & HLA mismatches 9/64 patients have HLA antibodies All are female 88% is HLA-DR3 and/or DR4 positive 23/65 HLA-B18 zonder B8 16/65 HLA-B8 zonder B18 14/65 HLA-DR3 en/of DR4 zonder B8 of B18 3/65 HLA-DRB3*02 (obv DRB1 type) 4/65 Geen HLA associatie (DR8,DR10,DR15) Create or use: Stemcell (haplo) banks 16

Belgian CB Registries : nov 2016 - homozygotes Total: 20697 % at least HLA-A and HLA-B homozygous Cord Bloods 403; 2% 20294; 98% CB Total n homozygous Belgian CB Registries : nov 2016 - homozygotes Total: 20697 Total: 403 % homozygous Cord Bloods 403; 2% % HLA AB DRB1 vs HLA AB homozygous CB's 143; 35% 260; 65% 20294; 98% CB Total n homozygous AB DRB1 HZ AB HZ 17

Belgian CB Registries : nov 2016 - homozygotes Total: 20697 Total: 403 % homozygous Cord Bloods % HLA AB DRB1 vs HLA AB homozygous CB's 403; 2% 143; 35% 260; 65% 20294; 98% CB Total n homozygous AB DRB1 HZ AB HZ detail of homozygous Belgian cord Bloods Total HLA- A B homozygous 260 total HLA- A B DRB1 homozygous 143 Different HLA- A B homozygous 59 Different HLA- A B DRB1 homozygous 38 0 50 100 150 200 250 300 Belgian CB Registries : 38 different HLA-A,B DRB1 homozygotes A1 B49 DR13 A1 B57 DR7 A1 B8 DR13 A1 B8 DR3(DR17) A2 B18 DR11 A2 B44 DR1 A2 B44 DR11 A2 B44 DR13 A2 B44 DR4 A2 B51 DR11 A2 B52 DR15 A2 B57 DR13 A2 B57 DR7 A2 B58 DR11 A2 B58 DR16 A2 B60 DR13 A2 B62 DR13 A2 B62 DR4 A2 B7 DR15 A2 B8 DR11 A2 B8 DR3(DR17) A23 B44 DR7 A23 B49 DR11 A24 B58 DR3(DR17) A24 B7 DR15 A24 B7 DR4 A29 B44 DR7 A3 B35 DR1 A3 B35 DR11 A3 B35 DR7 A3 B7 DR11 A3 B7 DR15 A3 B8 DR3(DR17) A30 B13 DR7 A30 B18 DR3(DR17) A31 B18 DR3(DR17) A33 B44 DR7 A68 B44 DR11 18

Belgian CB Registries : 38 different HLA-A,B DRB1 homozygotes A1 B49 DR13 A1 B57 DR7 A1 B8 DR13 2 A1 B8 DR3(DR17) 9 A2 B18 DR11 1 A2 B44 DR1 1 A2 B44 DR11 A2 B44 DR13 A2 B44 DR4 3 A2 B51 DR11 A2 B52 DR15 A2 B57 DR13 A2 B57 DR7 A2 B58 DR11 A2 B58 DR16 A2 B60 DR13 A2 B62 DR13 A2 B62 DR4 5 A2 B7 DR15 A2 B8 DR11 A2 B8 DR3(DR17) 5 A23 B44 DR7 A23 B49 DR11 A24 B58 DR3(DR17) A24 B7 DR15 A24 B7 DR4 A29 B44 DR7 A3 B35 DR1 A3 B35 DR11 1 A3 B35 DR7 A3 B7 DR11 A3 B7 DR15 A3 B8 DR3(DR17) 1 A30 B13 DR7 A30 B18 DR3(DR17) 1 A31 B18 DR3(DR17) 1 A33 B44 DR7 A68 B44 DR11 47% of patients HLA-A B DRB1 match with 11 cell lines HLA A B homozygous cords not required for this Diabetes cohorte (64 patients) 45 40 39 35 No patients with HLA-A3 B7 DR15 30 25 20 15 10 5 0 10 5 4 3 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 A3 B7 A2 B60 A29 B44 A3 B51 A2 B27 A1 B57 A2 B57 A24 B7 A23 B44 A2 B35 A2 B49 A3 B14 A24 B44 A24 B51 A31 B51 A1 B7 A1 B49 A1 B35 A1 B37 A1 B40 A2 B37 A2 B41 A3 B62 A3 B27 A3 B37 A24 B35 A2 B39 A24 B60 A25 B44 A26 B38 A26 B7 A32 B60 A33 B58 A68 B35 A2 B58 A30 B13 A2 B52 A24 B58 A33 B44 A68 B44 A B DR HZ AB HZ 19

60 HLA A B Homzygous cord bloods (19) compatible with 63 / 64 diabetes patients (Low Resolution HLA-AB - ABO match not considered ) 50 40 30 20 10 12 6 6 6 5 5 3 3 3 2 2 2 2 1 1 1 1 1 1 0 A1 B8 A2 B7 A2 B18 A3 B18 A2 B44 A2 B8 A2 B62 A24 B62 A11 B35 A3 B35 A2 B51 A25 B18 A B DR HZ AB HZ n patienten A33 B14 A2 B50 A3 B39 A3 B8 A23 B49 A31 B18 A30 B18 30/64 (47%) with 11 cell lines HLA-AB-DRB1 matched 18/64 (28%) with 6 cell lines HLA-AB DRB1 matched 40/64 (62%) with 6 cell lines HLA-AB matched 63/64 (98%) with 19 cell lines HLA-AB matched Same % as UK But cell lines with different HLA types ABO, HR-HLA not yet taken into account Final remarks Minimize immunogenic differences It is unlikely that autologous cells will be used HLA matching should be a primary strategy Bolton E., Bradley J, (2015) Regen. Med. 10(3), 287-304 Cfr strategies in organ and tissue transplantation - Evaluate the immunization status of the patient prior to ipsc implementation - Monitor allogenicity post implementation - Immunosuppressive treatment? increased risk for infection/malignancy Follow up on tolerance induction Targeted genome modifications (also for minimizing immunogenicity) - Hurdle: Lack of biomarkers for immunological Tolerance characterisation 20

Final remarks Be pragmatic e.g. consider short course of immunosuppression/ HLA matching Final remarks Be pragmatic (e.g. consider short course of immunosuppression/ HLA matching) Be Utopic -> hope for tolerance one day 21

Questions? 22