Incidence of Candida in patients admitted to ICU

Similar documents
Speciation of Candida using HiCrome Candida Differential Agar

Utility of the Germ Tube Test for the Identification of Candida albicans Directly from Positive Blood Culture Bottles. ACCEPTED

FLUCONAZOLE SUSCEPTIBILITY TESTING OF CANDIDA SPECIES BY DISC DIFFUSION AND AGAR DILUTION METHOD

Medical Mycology. Lab (1)

Exercise 19. Fungi: Molds and Yeasts F10 Or The Rotten World Around Us

Phenotypic characterization of Candida isolates obtained from non respiratory clinical specimens from superspeciality tertiary care center in Mumbai

Identification of yeast species in the oral cavity of Iranian soldiers by disk diffusion method

Identification of yeast species in the oral cavity of Iranian soldiers by disk diffusion method

LESSON ASSIGNMENT. After completing this lesson, you should be able to:

Preparation of Mycological Media & staining

LESSON ASSIGNMENT. After completing this lesson, you should be able to:

Cencountered problem in hospitalised

IDENTIFICATION OF CANDIDA SPECIES FROM CLINICAL SAMPLES AND THEIR ANTIFUNGAL SUSCEPTIBILITY PATTERNS Bhaskar U. A 1, Yashavanth Rai 2, Ronald R 3

Isolation & Characterization of Bacteria

Prevalence and Risk Factors of Candida blood Stream Infections in a Tertiary Care Hospital

MICROBIOLOGY #2 PREPERATION AND STERILIZATION OF CULTURE MEDIA

Evaluation of Five Phenotypic Tests in the Identification of Candida Species

A Simple and Reliable Assimilation Test for the Identification of Candida Species

Blood cultures. Sept 2013 A/Prof John Ferguson (nepal)

CONTROL OF MICROBIAL GROWTH - DISINFECTANTS AND ANTISEPTICS

testing for the daily routine?

Diagnostic Microbiology

Int.J.Curr.Microbiol.App.Sci (2018) 7(8):

INTRODUCTION water-soluble Figure 1.

Microbiology Chapter 2 Laboratory Equipment and Procedures 2:1 The Light Microscope MICROSCOPE: any tool with a lens to magnify and observe tiny

Investigation of Association between Slime Production by Candida Spp and Susceptibility to Fluconazole and Voriconazole

CONTROL OF MICROBIAL GROWTH - DISINFECTANTS AND ANTISEPTICS

The Cat s Out of the Bag: Microbiological Investigations of Acute Transfusion Reactions.

Disk diffusion test and E-test with enriched Mueller-Hinton agar for determining susceptibility of Candida species to voriconazole and fluconazole

Lab Three :. Sensitivity test:

Microbial assay measures the activity of antibiotics (Extent of ability to inhibit

THE BIOFILM PRODUCTION BY VARIOUS CANDIDA SPECIES ISOLATED FROM DIFFERENT CLINICAL SAMPLES

Cut-off Values and Species-Specific Breakpoints 12/19/2016

The goal of teaching:

Identifying Enterobacter aerogenes from a Mixed Culture of Unknown Gram Positive and Gram Negative Bacteria Kevin Le November 13, 2013

Project 5: Urine Cultures and Identification

Candida biofilm. José Garnacho Montero Hospital Universitario Virgen del Rocío Sevilla. Spain

Int.J.Curr.Microbiol.App.Sci (2016) 5(12):

Adapted from Biology 15 Laboratory Manual Supplement: Wrightsman, Ininns and Cannon-Moloznic, Saddleback College, CA 92692

Sample collection & laboratory methods for identification bacteria. Lab. 2 A.T. Samira

Approximately 20% of the responding CLSI membership whose hospitals had greater than 200 beds was performing antifungal testing.

Microbiological Methods

PURE CULTURE TECHNIQUES

MICROBIOLOGY AND INVASIVE FUNGAL INFECTION. Javier Pemán, MD, PhD. Mycology Unit, Hospital Univ. La Fe Valencia (Spain)

What have we learnt from clinical trials in invasive candidiasis?

Introduction Background of the study

Clinical Laboratory Comparison of Lysis-Centrifugation and BACTEC Radiometric Blood Culture Techniques

SELECTED QUESTIONS F ROM OLD MICRO 102 QUIZZES PART I EXPERIMENTS 1 THROUGH 7

DAIRY WATERS. (Coliform Group and Escherichia coli) [E. coli verification required only on source water] IMS #24

Microbiology Clinical Practicum Objectives - CLS 643

Bacterial Transformation: Unlocking the Mysteries of Genetic Material

Preliminary Evaluation of a Semisolid Agar Antifungal Susceptibility Test for Yeasts and Molds

Int.J.Curr.Microbiol.App.Sci (2014) 3(10)

Project 7: Wound Cultures and Identification

International Journal of Health Sciences and Research ISSN:

Standard Operating Procedure

Dr. Rukumani Devi Velayuthan Mycology Unit Co-ordinator PPUM

Lab Activity #14 - Bacteriological Examination Of Water and Milk (Adapted from Lab manual by Dr. Diehl)

Bacteriological analysis of plastic and wood chopping boards

3.0 RESEARCH METHODOLOGY The composition of media for the growth of different Candida species, chemicals and reagents, equipment and glassware used

ABC. Methods for Determining Bactericidal Activity of Antimicrobial Agents; Approved Guideline. Volume 19 Number 18

Multicenter Evaluation of Four Methods of Yeast Inoculum Preparation

Orthophenylphenol in healthcare environments: a trial related to a new administration method and a review of the literature*

Empfindlichkeitstestung bei Pilzen Neuigkeiten? Bericht aus einem EUCAST AFST (yeasts and moulds) Netzwerk-Laboratorium

Vulvovaginal Candidiasis due to non albicans Candida: its species distribution and antifungal susceptibility profile

Pathogenic Bacteria. culture media. Components of the Typical Culture Medium: Culture Media Importance:

Evaluation of Candida albicans Diagnosis by using conventional PCR. Abstract

Antifungal Resistance: Focus on Candida species

MLT 116L Clinical Microbiology Lab

for Antifungal Susceptibility Testing of Yeast Isolates

for Antifungal Susceptibility Testing of Yeast Isolates

for Antifungal Susceptibility Testing of Yeast Isolates

NATIONAL STANDARD OF THE PEOPLE S REPUBLIC OF CHINA. National Food Safety Standard

International Journal of Health Sciences and Research ISSN:

Isolation and Characterization of Escherichia coli

LAB NOTES FOR EXAM 1 SECTION

Antibiotic Susceptibility Testing (ABST/AST)

2. 47 mm grid marked, white sterile 0.45 micron membranes (Millipore or equivalent) 4. Vacuum pump capable of inches of vacuum

Rapid identification of Candida glabrata in Candida bloodstream infections

Outline. This week s plans Introduction to Kirby Bauer and Antibiotics Introduction to Biochemical analysis of strains

Foundations in Microbiology Seventh Edition

Microbiology Section Pathology Resident Self Assessment Checklist. 2. Proper collection and specimen handling procedure.

GCSE 4483/02 BIOLOGY 3 HIGHER TIER BIOLOGY. P.M. TUESDAY, 17 May hour S PMT. Candidate Number. Centre Number. Surname.

Biology 123 Microbiology Fall 2015

ESCMID Online Lecture Library. by author

Emergence of Non albicans Candida as potential pathogen --- Change in spectrum poses therapeutic challenge

Bacteria and other microbes have particular requirements for growth When they reside in and on our bodies or in the environment, they harvest their

Molecular characterization and phylogenetic analysis of protease producing Streptomyces sp. isolated from mangrove sediments

Chapter 9 Antimicrobial Susceptibility Testing (Agar Disk Diffusion Method)

South As. J. Biol. Sci. 2(1): ISSN Molecular Identification of Closely Related Candida Spp. based 18S rrna Markers

Msoffe and Mbilu Afr. J. Trad. CAM (2009) 6 (4): THE EFFICACY OF CRUDE EXTRACT OF ALOE SECUNDIFLORA ON CANDIDA ALBICANS

Isolation and Identification of Candida Species from the Oral Cavity Using CHROMagar Candida

SCHEDULE. Friday: Pet Investigations: Plate counts - how to know how many clones of your pet you have (pg. 9-10)

INTRODUCTION Sanitization sterilization Antibiotics Bactericidal Bacteriostatic Antiseptics disinfectants

University Medical Microbiology

--> Buy True-PDF --> Auto-delivered in 0~10 minutes. GB Translated English of Chinese Standard: GB4789.

GB Translated English of Chinese Standard: GB NATIONAL STANDARD OF THE

Bacterial Plate Preparation. ~ Using aseptic techniques ~

GROWTH AND SURVIVAL OF PATHOGENIC E. COLI DURING CURDLING OF MILK

Ministry Saint Michael s Hospital Laboratory LABORATORY POLICY AND PROCEDURE

Transcription:

Available online at www.pelagiaresearchlibrary.com Advances in Applied Science Research, 2013, 4(5):282-286 Incidence of Candida in patients admitted to ICU Nidhi Singh and Jayanthi Abraham* ISSN: 0976-8610 CODEN (USA): AASRFC Microbial Biotechnology Laboratory, School of Biosciences and Technology, VIT University, Vellore, Tamil Nadu, India ABSTRACT Profiling and antifungal susceptibility of Candida sp. in blood was conducted and the specimens were collected from Thanjavur Medical College, Thanjavur, India. A total of 31 isolates were selected for prospective analysis over a period of 6 months. Candidemia was diagnosed by positive blood culture bottles. Candida sp. were identified to species level by germ tube test, Hi- Chrome Candida agar, methyl blue SDA agar, rapid trehalose and maltose test, corn meal agar and sugar fermentation tests using standard techniques. All the Candida isolates were tested for antifungal susceptibility to amphotericin B and fluconazole by the disc diffusion method. Most frequent isolates were C. parapsilosis (66%), C. tropicalis (19%), C. albicans (6%), C. glabrata (6%) and C. guillermondii (3%). About 6.5% polymicrobial candidemia has been described. Most of the blood isolates were from the Intensive Care Units (ICU) (81%) especially neonatal (61%) and few from other wards (19%). 84% isolates were resistance to fluconazole, 56% isolates were resistant to voriconazole and 16% isolates were resistance to amphotericin B. Among the isolates C. parapsilosis was found to be predominant in occurrence. Most of the isolates were resistant to fluconazole. Keywords: Candidemia, ICU, antifungal susceptibility. INTRODUCTION There has been an increase in the incidence of opportunistic infections in immunocompromised patients and children. Their incidence has greatly increased over the past several decades with the introduction of broad-spectrum antibiotics. Candida sp. has become the fourth most common organism responsible for bloodstream infection in the intensive care unit (ICU) [Eggimann et al., 2003]. Candida sp. account for 9-13% of all blood isolates in neonatal intensive care units NICUs [Baradkar et al., 2008]. Among them, the Candida albicans and several related Candida sp. are of foremost importance as opportunistic pathogens in immunocompromised hosts, which may cause life threatening infections. Although C. albicans is the species mainly isolated from patients but other species also cause nearly 40% of the infections. It is therefore very important to identify C. albicans as well as other Candida sp. rapidly yet reliably in routine clinical microbiology practice. The primary isolation of yeasts from biological specimens is generally based on culture on Sabouraud dextrose agar, a medium that does not allow species identification; differential isolation media like chromogenic media that distinguish Candida sp. on the basis of the morphology and colour of the colonies on primary cultures were evaluated. A valuable and simple test for the rapid, presumptive identification of C. albicans is the germ tube test [Donald Sheppard et al, 2008].The resistance of non - C. albicans isolates to currently available antifungal drugs represents a major challenge for future empirical therapeutic and prophylactic strategies [Krcmery and Barnes, 2002]. Rapid and accurate species identification is thus necessary to optimize the choice of antifungal therapy. The 282

antifungal susceptibility testing of the yeast isolates are done by disc diffusion method by using amphotericin B, voriconzole and fluconazole. The profile of Candida sp. differs from geographical locations. In many reports, identification of Candida sp. isolates has been based on the commercially available kits for their biochemical characteristics. In recent years Candida sp. infection has increased clinical awareness. Thus, the present work was aimed to culture and identify the Candida sp. from blood stream infections and to determine the distributions of species involved in these infections. MATERIALS AND METHODS Sample Collection For a period of six months the clinical isolates of Candida sp. from blood were collected from 31 patients from Thanjavur Medical College, Thanjavur, India. The blood was usually drawn for from peripheral vein, e.g. vena cubitalis for isolation of the pathogen. Blood was collected with a sterile needle and syringe and evacuated in bottle of blood culture bottle. Thorough disinfection of the patient s skin was done by scrubbing the venipuncture site with 70% alcohol or iodine, to reduce the contamination rate. Fungal blood cultures The biphasic brain heart infusion (BHI) (Hi-Media, Mumbai, India) agar plus broth was used for fungal blood culture. 5 ml of blood was inoculated into the culture bottles, they were incubated in an upright position for 30 d at 37º C. Cultures were examined daily for visual evidence of growth, and each examination was followed by gentle mixing of the blood-broth mixture over the agar slants. Visual growth was stained and sub-cultured into appropriate media for identification [Glenn Roberts and John Washington II, 1975]. The growth was sub-cultured on SDA medium and then incubated at 37ºC. For morphological characterization Lacto phenol cotton blue test (LPCB) was done. Test for germ tube formation The suspected Candida cultures were inoculated into 0.5 ml of human serum in a small tube and incubated at 37º C for 2 h. After 2 h of incubation, a loop-full of culture was placed on a glass slide and overlaid with a cover-slip. The preparation was examined under bright field microscope for germ tube with no constriction at the point of attachment to the yeast cells which is noticed only in C. albicans [Donald Sheppard et al, 2008]. Differential identification of Candida Hichrome Candida agar Overnight colonies were inoculated on Hichrome Candida agar (Hi-Media, Mumbai, India) and incubated at 37ºC for 48 h. The colonies were identified by their colour [Baradkar et al., 2010] Methyl Blue-Sabouraud Agar This fluorometric test for rapid identification of C. albicans was performed according to the methods of Roggentin et al. [1999]. Overnight colonies were transferred to petri dishes containing methyl blue- sabrouraud media. Petri dishes were incubated at 37ºC and the results were evaluated after 48 h of incubation. The colonies were evaluated under UV lamp (wavelength 365 nm) for brightly fluoresced colonies [Mine et al., 2001]. Test for chlamydospore formation The suspected Candida cultures were streaked on the Corn Meal Agar (CMA) (Hi-Media, Mumbai, India) plate. A heavy inoculum of yeast was streaked across a plate containing the medium and a cover slip is placed over it. The streak was projected beyond the cover slip. Then the plates were incubated at 25º C for 48-72 h. The edge of the cover slip was examined under low power and high power objective for chlamydospores, blastospores and pseudohyphae [Staib and Morschhauser, 2007]. Carbohydrate fermentation tests Fermentative yeasts recovered from clinical specimen s produces carbon dioxide and alcohol. Production of gas rather than a ph shift is indicative of fermentation. The test organism was inoculated in the sugar medium and incubated at 37º C for 48-72 h. The results were interpreted by colour change from yellow to pink and gas production in the Durham s tube. 283

Rapid Trehalose and Maltose test The test is based on the capacity of C. glabrata to hydrolyze trehalose (but not maltose) into two glucose molecules in less than one minute. Three URS-1 G (Teco diagnostics, U.S.A) urine reagent strips were used for each test. The detection pad of the first strip was hydrated with one drop of 0.01% trehalose solution; the second strip was hydrated with one drop of 0.01% maltose solution, and the third with one drop of sterile distilled water. One or two yeast colonies with an identical appearance were picked from the agar plates and smeared directly on to each of the three reagent pads. Care was taken to discard all excess liquid. A positive test on any strip was indicated by comparing the corresponding colour chart within 1 minute. [Willinger B., 2005]. Anti Fungal Susceptibility Test (AFST) All the clinical isolates were screened for antifungal susceptibility testing by the disc diffusion method using amphotericin-b (100 units), voriconazole (1µg) and fluconazole (25µg) (Hi-Media, Mumbai, India), on Muller Hinton agar (Hi-Media, Mumbai, India) (MHA) supplemented with 2% glucose and methylene blue dye 0.5µg/ml. The test isolates were streaked over the entire agar surface of the plate three times, turning the plate at 60º angle between each streaking and allowed the inoculum to dry for 5-15 minutes with lid in place. The anti- fungal discs such as amphotericin-b and fluconazole were placed aseptically by sterile forceps at the centre at least 24 mm apart. Then the plates were incubated at 37ºC for 48 h. Zone diameters were interpreted as per the approved NCCLS (M44-A) guidelines [Clinical and Laboratory Standards Institute. 2004]. RESULTS Sample Collection In the total number of specimens collected 58% of isolates were from female patients and 42% of isolates were from male patients, 61% isolates were from age ranging below 10, 13% isolates were from age ranging 50 and above, 7% isolates were isolated from age ranging 21-30 and 41-50 and 3% from age 31-40. Fungal blood cultures Fungal blood culture bottles showed remarkable growth in most of the bottles and the fungal colonies were identified as Candida sp. by LPCB staining (Fig. 1). Fig. 1 LPCB staining of Candida sp. Test for germ tube formation There was only two species of Candida isolated. Both of these strains were germ tube test positive. Most of the laboratories uses germ tube test for the identification of Candida sp. because it is easier to perform and interpret. 284

Differential identification of Candida Both Corn meal agar and Hi Chrome agar were useful in identifying the two isolates the species identified produced fluorescence under UV light in methyl blue SDA agar. In sugar fermentation test two strains which were identified were C. tropicalis and C. parapsilosis. For analysis these strains were considered as C. parapsilosis. C. parapsilosis is the second most common species found in patients with candidemia. The carbohydrate fermentation tests for Candida sp. are presented in table 1. The rapid trehalose and maltose test were positive for the two C. glabrata isolates. The limited sugars used in sugar fermentation test, produces same results for C. glabrata and C. parapsilosis. Table 1. Sugar Fermentation Test Blood isolates Sugar Glucose Sucrose Lactose Maltose Trehalose Film 1 + - - - - - 2 + - - - - - 3 + - - - - - 4 + - - - - - 5 + - - - - - 6 + - - - - - 7 + - - - - - 8 + - - - - - 9 + + - + + narrow 10 + - - - - - 11 + - - - - - 12 + + - + + narrow 13 + - - - - - 14 + - - - - - 15 + - - - - - 16 + + - + + narrow 17 + - - - - - 18 + + - + + narrow 19 + - - - - - 20 + + - + + narrow 21 + - - - - - 22 + - - - - - 23 + + - + + narrow 24 + - - + - - 25 + - - - - - 26 + + - + + narrow 27 + + - + + narrow 28 + - - - - - 29 + - - - - - 30 + - - - - - 31 + - - + - - Antifungal susceptibility test Out of the total number of isolates 83.87% strains were sensitive for amphotericin B, 43.55% were sensitive to voriconazole and 19.35% strains were sensitive for fluconazole. Some Candida species like C. tropicalis, C. albicans and C. guillermondii showed 100% resistance to fluconazole, whereas C. parapsilosis and C. glabrata showed 80% and 50% resistance to fluconazole respectively. Even 50% strains of C. tropicalis and C. glabrata were resistant to amphotericin B and 5% strains of C. parapsilosis were resistant to Amphotericin B. All strains of C. albicans and C. guillermondii were sensitive to amphotericin B. DISCUSSION Fungemia (Candidemia) is the presence of fungi or yeasts in the blood. It is most commonly seen in immunosuppressed or immunocompromised patients. The two most important risk factors are the use of broadspectrum antibiotics and colonization by fungi. Other risk factors are dialysis, diabetes, lowered intestinal flora, suppressed immune system, high severity of illness, multiple abdominal surgeries, use of steroids and burns. Candidemia showed high mortality and morbidity. The most common pathogen is Candida albicans, causing roughly 70% of fungemia. In our study Candida isolates were predominantly isolated from female patients (58 %). 285

Further candidemia was frequently associated with infants (61%) and age group 50 (13%) which was nearly correlated with studies by Shivaprakasha et al., [2007] of Kerala. They observed candidemia isolates more frequently from infants 44% and 40 year age group 23.7%. Due to its ease in performing and result interpretation, germ tube method is generally used for identification of C. albicans but some C. albicans are germ tube negative, methyl blue SDA medium can be adopted to identify these germ tube negative C. albicans. In Hi-chrome Candida media the Candida sp. were identified by their colony colour and in corn meal agar the corresponding morphology for each species were observed. There was 100% correlation among species identification by corn meal agar and Hi chrome agar. The rapid trehalose and maltose test requires low inoculum. It differentiates C. glabrata from C. parapsilosis by fermenting the trehalose but not maltose within 5 minutes. Thus it is a rapid and cost effective test for the identification of C. glabrata. The Antifungal susceptibility of the isolates was determined by disc diffusion method. There was a dramatic increase in resistance with C. tropicalis, C. parapsilosis, C. albicans and C. guillermondii. This may be due to the difficulty associated with the differences in growth rates and the end point interpretation in disc diffusion method leads to low reproducibility. Most of the Candida sp. was susceptible to amphotericin B and the incidence of amphotericin resistant Candida sp. in our study was 16%. CONCLUSION Candidemia is considered as a major problem with regard to fungal infections in hospitals. The emergence of resistance against amphotericin B and an increase in the resistance against flucanazole was observed during the study. Further continuous surveillance programme are needed in order to identify the possible changes in the species distribution and antifungal susceptibility patterns of Candida isolates. REFERENCES [1] Baradkar, V.P., Mathur, M., Kumar, S. and Rathi, M. Ann. Trop. Med. Public Health., 2008, 1, 5-8. [2] Donal C. Sheppard, Marie-Claude Locas, Christiane Restieri and Michel Laverdiere. J Clin. Microbiol., 2008, 46, 3508-3509. [3] Eggimann, P., Garbino, J. and Pittet, D. Lancet Infect. Dis., 2003. 3, 685-702. [4] Glenn, D. Roberts and John, A. Washington II. J.Clin. Microbiol., 1975, 1, 309-310. [5] Krcmery, V and Barnes, A. J. J. Hosp. Infect., 2002, 50, 243-260. [6] Mine Yücesoy and Serhat Marol. Annals of Clinical Microbiology and Antimicrobials, 2003, 2, 1-7 [7] Roggentin P, Krug G, Schaure R. and Brasch J. Mycoses, 1999, 42, 33-6. [8] Shivaprakasha, S, Radhadrishnan, K. and Karim, P. M. S. Indian Journal of Medical Microbiology, 2007, 25, 405-407. [9] Staib P and Morschhauser J. Mycoses, 2007, 50, 1-12. [10] Willinger B, Susanne W, Alexander M. Hirsch, Manfred L. Rotter and Mammad M. J. Clin. Microbiol., 2005, 43, 499-501. 286