CalPhos Mammalian Transfection Kit User Manual

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CalPhos Mammalian Transfection Kit User Manual Cat. No. 631312 PT3025-1 (PR3Z643) Published 22 December 2003

Table of Contents I. Introduction 3 II. List of Components 4 III. Additional Materials Required 4 IV. CalPhos Mammalian Transfection Protocol 5 V. Troubleshooting Guide 6 VI. References 6 VII. Related Products 7 Appendix A: Optimization of Transfection 8 Appendix B: Culture Plate Conversions 9 Clontech Laboratories, Inc. www.clontech.com Protocol No. PT3025-1 2 Version No. PR3Z643

I. Introduction CalPhos Mammalian Transfection Kit User Manual The ability to introduce exogenous DNA into cultured cells is a powerful tool for molecular and cell biologists. Of the methods to introduce DNA into mammalian cell cultures, the calcium phosphate method is one of the most widely used because it is inexpensive, simple, and suitable for a range of different cell types (Ausubel et al.,1994; Graham & van der Eb, 1973). The CalPhos Mammalian Transfection Kit provides high-quality, pretested reagents suitable for both transient and stable transfections. The kit includes all the reagents necessary to perform 100 transfections in 10-cm plates, or 750 transfections in 35-mm plates. Solution A Plasmid DNA Calcium solution Solution B 2X HBS Add Solution A to Solution B while vortexing Incubate 20 min Apply transfection solution to subconfluent cell culture Incubate 2 12 hr Replace transfection solution with complete growth medium Assay for transient gene expression or Begin selection for stable transformants (24 2 hr post-transfection) Figure 1. Flow chart for using the CalPhos Mammalian Transfection Kit. Protocol No. PT3025-1 www.clontech.com Clontech Laboratories, Inc. Version No. PR3Z643 3

II. List of Components Store HBS at 20 C; store all other components at 4 C. The following reagents are sufficient for 100 transfections in 10-cm plates or 750 transfections in 35-mm plates. 9 ml 2 M Calcium Solution 2 x 35 ml 2X HEPES-Buffered Saline (HBS) We recommend dispensing this buffer into small aliquots, to be stored at 20 C. Avoid multiple freeze-thaw cycles. When an aliquot is in use, store it at 4 C for up to one week. 2 x 35 ml Sterile H 2 O III. Additional Materials Required Cell culture plates or flasks Tubes (12 x 75-mm sterile tubes) Cell culture medium (appropriate growth medium for mammalian cells in culture) Fetal bovine serum, newborn calf serum, or equivalent (to supplement the growth medium) Phosphate buffered saline (PBS; ph 7.4) Final Conc. To prepare 2 L of solution Na 2 HPO 4 58 mm 16.5 g NaH 2 PO 4 17 mm 4.1 g NaCl 68 mm 8.0 g Dissolve the above components in 1.8 L of deionized H 2 O. Adjust to ph 7.4 with 0.1 N NaOH. Add deionized H 2 O to final volume of 2 L. Store at room temperature. 1X Trypsin/EDTA (Life Technologies Cat. No. 25300-054) Plasmid DNA The DNA should be of high quality e.g., double CsCl-banded or column-purified DNA. Clontech offers NucleoBond Plasmid Purification Kits and cartridges which yield transfection-grade plasmids. See Related Products for more information. Clontech Laboratories, Inc. www.clontech.com Protocol No. PT3025-1 4 Version No. PR3Z643

IV. CalPhos Mammalian Transfection Protocol The following protocol is designed for use with adherent cultures growing in 35-mm tissue-culture plates. If you are using plates, wells, or flasks of a different size, adjust the volume of the transfection solution in accordance with your culture volume. See Appendix B for culture plate conversions. All steps of the following protocol should be performed in a sterile tissue culture hood. 1. Plate the cells the day before the transfection experiment. The cells should be 50 80% confluent the day of transfection. Generally, we plate 4 x 10 5 cells/35-mm plate. 2. 0.5 3 hr prior to transfection, replace culture medium on plates to be transfected with 2 ml of fresh culture medium per 35-mm plate. 3. For each transfection, prepare Solution A and Solution B in separate sterile tubes. Solution A: add components in the following order: 2 4 µg Plasmid DNA Sterile H 2 O 12.4 µl 2 M Calcium Solution 100 µl Total Volume Solution B: 100 µl 2X HBS Note: To reduce variability when transfecting multiple plates with the same plasmid DNA, prepare master solutions of Solutions A and B sufficient for all plates. 4. Carefully and slowly vortex Solution B while adding Solution A dropwise. (Alternatively, blow bubbles into Solution B with a 1-ml sterile pipette and an autopipettor while adding Solution A dropwise.) 5. Incubate the transfection solution at room temperature for 20 min. 6. Gently vortex transfection solution and then add solution dropwise to culture plate medium. (Add 200 µl of transfection solution per 35-mm plate.) 7. Gently move plates back and forth to distribute transfection solution evenly. (Do not rotate plates as this will concentrate transfection precipitate in the center of the well or plate.) 8. Incubate plates at 37 C for 2 12 hr in a CO 2 incubator. 9. Remove calcium phosphate-containing medium and wash cells with medium or 1X PBS. 10. Feed plate with 2 ml fresh complete growth medium and incubate at 37 C until needed for assay. 11. Assay for transient gene expression or start selection for stable transformants 24 72 hr post-transfection. Protocol No. PT3025-1 www.clontech.com Clontech Laboratories, Inc. Version No. PR3Z643 5

V. Troubleshooting Guide A. Low Transfection Efficiency Poor precipitate formation Solution: Addition of the calcium/dna (Solution A) to the 2X HBS (Solution B) should be performed dropwise and with continuous mixing. Adding Solution A too quickly or with too little mixing can result in a poor precipitate. Poor quality DNA Solution: The A 260 /A 280 ratio of the plasmid DNA should be 1.7. ph not optimal Solution: The ph of the HBS should be between 7.05 and 7.12. However, during prolonged storage, the ph of the solution may change; therefore, use the transfection kit within the shelf life indicated on the accompanying Product Analysis Certificate (PAC). B. Variable Transfection Efficiency in Experiments There will always be some variability in transfection efficiencies. We recommend performing transfections in triplicate to minimize the variability. Variable cell density Solution: Keep cell density constant after optimizing transfection procedures. Generally we use cultures that are 50 80% confluent at the time of transfection. Suboptimal cell growth Solution: Keep cells healthy in culture. Cells should be in mid-log phase growth when plated for transfection. Transfection efficiencies may decrease for cell lines that have been passaged for too generations. VI. References Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A. & Struhl, K. (1994) In Current Protocols in Molecular Biology (Greene Publishing Associates and John Wiley & Sons, Inc., NY) Vol. 1, Ch. 9. Freshney, R. I. (2000) Culture of Animal Cells, Fourth Edition (Wiley-Liss, NY). Clontech Laboratories, Inc. www.clontech.com Protocol No. PT3025-1 6 Version No. PR3Z643

VII. Related Products CalPhos Mammalian Transfection Kit User Manual For the latest and most complete listing of all Clontech products, please visit www.clontech.com Cat. No. Clonfectin TM 631301 Living Colors Fluorescent Protein Reporter Vectors Tet-On and Tet-Off Expression Systems and Vectors Great EscAPe TM Secreted Alkaline Phosphatase (SEAP) Vectors and Kits β-galactosidase Vectors and Kits IRES Expression Vectors Retro-X TM Expression Vectors MATCHMAKER Mammalian Two-Hybrid 630301 Assay Kit NucleoBond Plasmid Kits, MIni Kit 635925 635926 635927 Midi Kit 635929 635930 635931 Maxi Kit 635933 635934 635935 635936 Mega Kit 635938 Giga Kit 635939 NucleoBond AX Tips Protocol No. PT3025-1 www.clontech.com Clontech Laboratories, Inc. Version No. PR3Z643

Appendix A: Optimization of Transfection The efficiency of a mammalian cell transfection is primarily dependent on the host cell line used. Optimization of the transfection parameters for each cell type is crucial to obtaining consistently successful transfections. Therefore, for each cell type you plan to use, perform preliminary experiments to determine the optimal: 1) cell density; 2) amount and purity of DNA; and 3) transfection incubation time. For the preliminary experiments, the host cell line can be transfected with a reporter expression vector, such as pcmvβ (Cat. No. 631719) or pseap2-control Vector (Cat. No. 631717). The success of the transfection can then be estimated by assaying for β-galactosidase or secreted alkaline phosphatase. Once the transfection parameters have been optimized, they should be kept consistent from one experiment to the next to obtain reproducible results. The following is a general guideline for optimizing the transfection parameters. To optimize transfection parameters, it is best to perform a series of small-scale transfections. This can be done conveniently in 12-well or 6-well plates. To optimize cell density: keeping all other parameters constant, plate host cells in individual wells of a 6-well plate at varying densities (e.g., 5 x 10 4, 1 x 10 5, 2 x 10 5, 4 x 10 5, 8 x 10 5 ). 24 72 hours post-transfection, assay for reporter gene (SEAP or β-galactosidase) activity. Record results. Repeat the experiment once or twice to account for day-to-day variation. Choose the density with the highest reporter gene activity. The other parameters can be optimized in much the same way. Hold all other variables constant while varying the parameter you are testing. Transfection incubations should be maximal at 2 16 hours using the CalPhos Mammalian Transfection Kit. You may want to try incubation times from 1 18 hours for optimization. After transfections have been optimized, scale-up or scale-down as necessary for the size of culture plate you are using (see Appendix B for a table of conversions). Clontech Laboratories, Inc. www.clontech.com Protocol No. PT3025-1 Version No. PR3Z643

Appendix B: Culture Plate Conversions CalPhos Mammalian Transfection Kit User Manual table ii. culture plate conversion Size of Plate Growth Area Relative Area* Recommended (cm 2 ) Volume 96 well 0.32 0.04 X 200 µl 24 well 1.88 0.25 X 500 µl 12 well 3.83 0.5 X 1.0 ml 6 well 9.4 1.2 X 2.0 ml 35 mm 8.0 1.0 X 2.0 ml 60 mm 21 2.6 X 5.0 ml 10 cm 55 7 X 10.0 ml Flasks 25 3 X 5.0 ml 75 9 X 12.0 ml * Relative area is expressed as a factor of the growth area of a 35-mm culture plate. Notice to Purchaser This product is intended to be used for research purposes only. It is not to be used for drug or diagnostic purposes, nor is it intended for human use. Clontech products may not be resold, modified for resale, or used to manufacture commercial products without written approval of Clontech Laboratories, Inc. NucleoBond anion-exchange resin is covered under European Patent No. 496822. NucleoBond is a registered trademark of MACHEREY-NAGEL GmbH & Co. KG. Clontech, Clontech logo and all other trademarks are the property of Clontech Laboratories, Inc. Clontech is a Takara Bio Company. 2005 Protocol No. PT3025-1 www.clontech.com Clontech Laboratories, Inc. Version No. PR3Z643

Notes: Clontech Laboratories, Inc. www.clontech.com Protocol No. PT3025-1 10 Version No. PR3Z643

Notes: CalPhos Mammalian Transfection Kit User Manual Protocol No. PT3025-1 www.clontech.com Clontech Laboratories, Inc. Version No. PR3Z643 11