Measuring Neuronal Activity:

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icell GlutaNeurons Application Protocol Measuring Neuronal Activity: Maestro Multielectrode Array Introduction icell GlutaNeurons, human glutamatergic cortical neurons derived from induced pluripotent stem (ips) cells, exhibit typical physiological characteristics and form functional neuronal networks. Due to their high purity, functional relevance, and ease of use, icell GlutaNeurons represent an optimal in vitro test system that is suitable for use in targeted drug discovery, toxicity testing, and other life science research. Axion BioSystems Maestro multielectrode array (MEA) technology is a noninvasive, label-free platform that measures the electrical activity of single cells or cellular networks. With proper handling, icell GlutaNeurons can be thawed and cultured directly on MEAs to form neuronal networks amenable to electrophysiological interrogation. This Application Protocol describes how to thaw, plate, and culture icell GlutaNeurons on the Maestro MEA system and provides basic instructions for data acquisition and analysis. Required Equipment, Consumables, and Software The following equipment, consumables, and software are required in addition to the materials specified in the icell GlutaNeurons User s Guide. Item Vendor Catalog Number Equipment 12-channel Pipettor, 200 µl Maestro Multielectrode Array (MEA) System Consumables icell GlutaNeurons Kit, 01279 1 icell Neural Supplement B 2 icell Nervous System Supplement 3 Multiple Vendors Axion Biosystems Cellular Dynamics International Cellular Dynamics International Cellular Dynamics International 1 ml Pipette Multiple Vendors 10 ml Serological Pipette Multiple Vendors 20 µl Pipette Multiple Vendors R1034 M1029 M1031 48-well Multielectrode Array (MEA) Plate 2 Axion Biosystems M768-KAP-48 50% Polyethyleneimine (PEI) Solution Sigma 181978-100g Borate Buffer, 20X Thermo Fisher Scientific 28341 Laminin Sigma-Aldrich L2020 MicroClime Environmental Plate Lid (MicroClime Lid) LabCyte LLS-0310-IP Measuring Neuronal Activity: Maestro Multielectrode Array 1

Item Vendor Catalog Number Sterile 1.5 ml Centrifuge Tubes Sterile Tissue Culture Grade Distilled Water (Sterile Water) Software Axion Integrated Studio (AxIS, version 2.3 or higher) Multiple Vendors Multiple Vendors Axion Biosystems 1 Formerly known as icell GlutaNeurons (Cat. No. GNC-301-030-001). 2 Formerly known as icell DopaNeurons Medium Supplement (Cat. No. DNM-301-031-001). 3 Formerly assigned Cat. No. NSS-301-031-001. 4 This Application Protocol provides instructions for using 48-well MEA plates. Contact CDI s Technical Support (support@cellulardynamics.com; +1 (877) 320-6688 (US toll-free) or (608) 310-5100) for instructions for using other plate formats. Notes Workflow icell GlutaNeurons are thawed into complete BrainPhys medium and plated in complete BrainPhys medium plus laminin (dotting medium) into a 48-well MEA plate pre-coated with PEI solution. On day 1 post-plating, 50% of spent medium is replaced with complete BrainPhys medium. A 50% medium change is performed on day 2 post-plating and then every other day with complete BrainPhys medium. Synchronous neural activity can be detected starting around day 12 and may continue for 30 days. Methods Preparing the PEI Solution 1. Prepare 100 ml of 1X borate buffer by diluting 5 ml of 20X borate buffer in 95 ml distilled water. 2. Prepare an intermediate ~7% PEI solution by pouring 1 ml of 50% PEI solution into a 15 ml centrifuge tube and allow to settle. Add 6 ml of 1X borate buffer to obtain an intermediate ~7% solution. Note: Vortexing is recommended to get the viscous PEI into solution. 3. Prepare a final ~0.07% PEI solution by diluting 500 µl of intermediate ~7% PEI solution in 49.5 ml 1X borate buffer. Filter through a 0.22 µm filter unit. Note: The final ~0.07% PEI solution can be stored at 4 C for only 1 week. Fresh 0.07% PEI solution should be made each week for use. 2 Cellular Dynamics International, Inc.

Notes Preparing the 48-well MEA Plate 1. Add 80 µl/well of ~0.07% PEI solution to the 48-well MEA plate directly covering electrodes at the center of each well. Incubate at 37 C for 1 hour. 2. Aspirate the PEI solution from the 48-well MEA plate. Do not allow the wells to dry. 3. Immediately rinse twice with 300 µl/well of sterile D-PBS. Rinse once more with 300 µl/well of sterile water and air-dry the 48-well MEA plate with the lid removed in a sterile biological safety cabinet overnight. Note: It is critical to allow the MEA plate to air-dry overnight to achieve optimal cell attachment and maximal performance. Note: To avoid damaging the MEA plate, do not turn on the UV light in the biological safety cabinet while air-drying the plate. Media Preparation 1. Prepare the complete BrainPhys medium according to the icell GlutaNeurons User s Guide. Note: The complete BrainPhys medium can be stored at 4 C for 14 days. Given the experimental workflow, additional medium will need to be prepared. 2. Prepare the dotting medium with sterile-filtered complete BrainPhys medium and laminin using the volumes indicated in the table below. Dotting Medium Components Volume Final Concentration Complete BrainPhys Medium 900 µl Not Applicable Laminin, 1 mg/ml 100 µl 100 µg/ml Thawing icell GlutaNeurons The following procedure details thawing 1 vial of icell GlutaNeurons for plating into a 48-well MEA plate. Scale volumes accordingly for 2 vials of icell GlutaNeurons. Do not prepare more than two 48-well MEA plates at one time. 1. Equilibrate the complete BrainPhys Medium to room temperature for >15 minutes. 2. Thaw icell GlutaNeurons according to their User s Guide in a 50 ml centrifuge tube and dilute the cell suspension to a final volume of 10 ml in complete BrainPhys medium. 3. Remove a sample of the cell suspension and count icell GlutaNeurons using a hemocytometer to verify the viability and total number of cells listed in the Certificate of Analysis. Note: With proper handling, expect to recover within ~20% of the total cell number and viability listed in the Certificate of Analysis. 4. Concentrate icell GlutaNeurons by centrifuging at 400 x g for 5 minutes. 5. Aspirate the supernatant to just above the cell pellet, leaving ~50 µl, being careful not to disturb the pellet. Note: This volume approximation is provided due to the imprecise nature of vacuum aspiration. Measuring Neuronal Activity: Maestro Multielectrode Array 3

6. Measure the total volume of the cell suspension with a pipettor. Add the dotting medium to the cell suspension to reach a concentration of 12 million cells/ml. 7. Transfer the cell suspension to a 1.5 ml centrifuge tube. Notes Plating icell GlutaNeurons into the 48-well MEA Plate 1. Thoroughly mix the cell suspension by gently inverting the tube 2-3 times. Tilt the 48-well MEA plate at an angle so that the bottom of all wells are visible. Immediately dispense a 10 µl/well droplet of the cell suspension directly over the recording electrode area of the well of the 48-well MEA pre-coated with PEI solution (Figure 1). Note: CDI recommends dispensing 1 row at a time and mixing the cell suspension between each of the 6 rows to ensure an even distribution of the cell suspension. Figure 1: Example Droplet Placement Tilt the 48-well MEA plate 30 degrees and dispense a 10 μl droplet of cell suspension over the recording electrode area of each well. 2. Add ~1 ml of sterile water to each end of the 48-well MEA plate to prevent droplet evaporation. Do not allow water into the wells of the plate. Note: CDI recommends adding the water after plating the cell suspension to avoid water leaking into wells when the 48-well MEA plate is tilted. 3. Cover the 48-well MEA plate with a sterile, hydrated MicroClime lid and incubate in a cell culture incubator at 37 C, 5% CO2, 95% humidity for 60 minutes. Note: Do not allow the droplets to incubate in the 48-well MEA plate for longer than 75 minutes. 4. Before adding medium, load a 12-channel pipettor with sterile tips and remove tips from the positions identified in Figure 2. 4 Cellular Dynamics International, Inc.

Notes Figure 2: Tip Loading Strategy on a 12-channel Pipettor A 12-channel pipettor loaded with sterile tips arranged in the highlighted positions (green) is suitable for medium addition to a 48-well MEA plate. 5. Tilt the plate at a steep angle (~75-80 ). Gently and slowly add (~5 seconds add time) 150 µl/well of the complete BrainPhys medium down the side of the well of the 48-well MEA plate one row at a time using the 12-channel pipettor. Repeat this step to a final volume of 300 ml/well. Adding the medium too quickly will dislodge the adhered neurons. 6. Slowly return the 48-well MEA plate to a flat position on the surface of the biological safety cabinet to allow the medium gently to cover the droplet. 7. Cover the 48-well MEA plate with the MicroClime lid and incubate in a cell culture incubator at 37 C, 5% CO2, 95% humidity. Maintaining icell GlutaNeurons on the 48-well MEA Plate 1. On day 1 post-plating, equilibrate the complete BrainPhys medium to room temperature. 2. Load a 12-channel pipettor with sterile tips as identified in Figure 2 and remove 50% of the spent medium (150 µl) from each well of the 48-well MEA plate, 3 rows at a time. 3. Gently and slowly add (~5 seconds add time) 150 µl/well of the complete BrainPhys medium to the side of the well of the 48-well MEA plate one row at a time using the 12-channel pipettor. Adding the medium too quickly will dislodge the adhered neurons. 4. Cover the 48-well MEA plate with the MicroClime lid. Incubate in a cell culture incubator at 37 C, 5% CO2, 95% humidity for 1 day. 5. Repeat the 50% medium exchange on day 2 post-plating. 6. Perform a 50% medium exchange every other day. Data Acquisition and Analysis Electrical activity on the Maestro MEA system is acquired and analyzed using the AxIS Software according to the manufacturer s guidelines. Neural activity can be detected starting on day 4 post-plating and synchronous firing from a macro network can be detected at approximately day 12 post-plating. The optimal performance for synchronous network activity can be seen on days 18-24 postplating. 1. On the day of a recording, replace 50% of the spent medium with fresh complete BrainPhys medium approximately 2-4 hours before data acquisition. 2. Set the temperature of the instrument to 37 C and use environmental control for at least 5-10 minutes before recording a measurement. Measuring Neuronal Activity: Maestro Multielectrode Array 5

Summary icell GlutaNeurons can be thawed and cultured directly on MEAs where neuronal networks are established and the spontaneous electrical signals can be monitored. The methods presented here highlight the ease of using icell GlutaNeurons on the Maestro MEA system. Together, these products offer a higher throughput in vitro system for gathering relevant data on the electrophysiological activity of human neuronal cells. Notes Customer s Responsibilities CDI does not guarantee that you will obtain equivalent results from using icell or MyCell products as described herein or that such use will not infringe any intellectual property right(s) of any third party(ies). You are solely responsible for obtaining any licenses you may require for your specific research use(s) of the icell or MyCell products not expressly conveyed under CDI s terms and conditions of sale or other transfer of the icell or MyCell products to you. Conditions of Use For life science research use only. Trademarks icell and MyCell are registered trademarks, and Cellular Dynamics and the International, Inc. logo are trademarks of Cellular Dynamics All other brands, product names, company names, trademarks, and service marks are the properties of their respective owners. Copyright Notice 2018 Cellular Dynamics International, Inc. All rights reserved. Revision History Version 2.3: March 2018 AP-GNCAXN180302 6 Cellular Dynamics International, Inc.