The practical task of monoclonal IgG purification with CHT TM ceramic hydroxyapatite

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The practical task of monoclonal IgG purification with CHT TM ceramic hydroxyapatite Pete Gagnon, Jie He, Paul Ng, Julia Zhen, Cheryl Aberin, Heather Mekosh 11th Annual Waterside Conference, Chicago, May 1-3, 2006

Antibody purification with hydroxyapatite Hydroxyapatite has been known for more than a decade to remove leached protein A and aggregates from monoclonal antibodies. It also reduces endotoxin, DNA, and virus levels. The introduction of ceramic hydroxyapatite CHT has made it possible to exploit these capabilities in a high throughput chromatographic format.

How CHT works Hydroxyapatite is a crystalline mineral of calcium and phosphate with the structural formula Ca 10 (PO 4 ) 6 (OH) 2 It is a mixed mode adsorbent, interacting with biomolecules principally through two mechanisms: cation exchange and calcium metal affinity.

How CHT works Amino residues Classical cation exchange Dissociate with neutral salts like sodium chloride or with buffering salts like phosphate. Weaken or dissociate with increasing ph

How CHT works Carboxyl clusters Calcium chelation modulated by ion exclusion 15 60x stronger than ionic interactions alone Will not dissociate at any concentration of sodium chloride Dissociation requires phosphate

How CHT works Phosphoryl residues Calcium coordination modulated by ion exclusion 15 60x stronger than ionic interactions alone NaCl causes stronger DNA binding by suppressing charge repulsion between phosphates Dissociate with phosphate

How CHT works with IgG Most published applications report the use of phosphate gradients for IgG purification. Phosphate gradients simultaneously dissociate calcium affinity and cation exchange. Recent experience indicates that more effective contaminant clearance can be achieved with sodium chloride gradients at constant low phosphate concentrations.

How CHT works with IgG Most IgG monoclonals have weak affinity for CHT calcium but fairly strong charge interactions with CHT phosphates. Setting a constant low level of phosphate suspends weak calcium affinity interactions but leaves strong ionic interactions intact. A sodium chloride gradient can then dissociate ionic bonds. This elutes monomeric IgG. Aggregates elute at higher sodium chloride concentrations. Contaminants with a strong calcium affinity remain bound to the column until it is cleaned with concentrated phosphate.

Contaminant clearance Contaminant clearance in NaCl gradients Contaminant Aggregates Protein A CHOP DNA Endotoxin xmulv MVM Method HPSEC Cygnus ELISA Picogreen LAL (chromo) Infectivity* Infectivity* Clearance 1-2 logs 1-2 logs 2 logs >3 logs >4 logs >3 logs 2 logs *Testing performed by Charles River Laboratories

Contaminant distribution protein A purified human IgG1 10 mm NaPO4, ph 6.5 10CV gradient to 2M NaCl (10mM PO4) Clean 0.5M NaPO4 monomeric IgG LPA DNA LPS MVM xmulv CHT type I, 40 micron, 300 cm/hr

Contaminant distribution protein A purified IgG1 chimera 5 mm NaPO4, ph 6.5 40CV gradient to 2M NaCl (5mM PO4) Clean 0.5M NaPO4 monomeric IgG aggregate LPA DNA LPS CHT type I, 20 micron, 300 cm/hr

Contaminant distribution protein A purified human IgG1 5 mm NaPO4, ph 6.5 40CV gradient to 2M NaCl (5mM PO4) Clean 0.5M NaPO4 monomeric IgG LPA DNA LPS aggregate CHT type I, 20 micron, 300 cm/hr

Contaminant distribution protein A purified mouse IgG1 10 mm NaPO4, ph 6.5 20CV gradient to 1.5M NaCl (10mM PO4) Clean 0.5M NaPO4 monomeric IgG aggregate CHT type I, 20 micron, 300 cm/hr

Contaminant distribution Aggregate clearance with NaCl gradients HPSEC of process pools Bio-Silect 400-5 50 µl protein A purified IgG1 chimera, 0.8 ml/min 50mM Hepes, 1.0M NaCl, 2.0M urea, ph 7.2 Protein A, IgG pool CHT, IgG monomer pool

Ramifications Equivalent clearance in bind/elute or flow-through mode CHT-I 40µm OM Protein A IgG pool CHT pool bind/elute CHT pool flow-through Aggregate %, HPSEC n.d. >40% <1% <1% Protein A ng, Cygnus 0 162 <0.2* <0.2* DNA, ng picogreen 9.9 x 10 5 3.8 x 10 4 <1 <1 Endotoxin EU, LAL 2.8 x 10 3 5.0 x 10 2 <0.05 <0.05 *linear detection limit of the assay

Assessing the potential Initial screening conditions CHT type I, 20µm Equilibrate: 5mM NaPO4, ph 6.5 Load, 5%CV, protein A purified MAb Wash: 5CV EQ buffer Elute: 40 CV linear gradient to 2.0M NaCl (5mM NaPO4) Clean: 10 CV 0.5M NaPO4 If the MAb fails to elute, repeat at 10mM NaPO4 If it still fails to elute, repeat at 15mM

Select the phosphate concentration 40 CV linear gradient to 1.0M NaCl at constant phosphate concentrations as indicated 15mM 10mM 5mM Blue areas indicate monomeric IgG, trailing peak is aggregate Red line indicates NaCl gradient trace NaCl gradient followed by cleaning with 0.5M phosphate All experiments at ph 6.5 300 cm/hr Protein A purified IgG1 chimera on CHT type I 20 µm

Select the phosphate concentration Phosphate mm 5 10 15 Protein A ng/ml 0.03 0.03 0.01 DNA ng/ml <1.0 <1.0 3.9 Endotoxin EU/mL <0.05 1.0 1.6 Sample: protein A purified chimeric monoclonal IgG1. 22 ng/ml leached protein A, 2.3x10 3 ng/ml DNA, 1.9x10 4 EU/mL endotoxin Linear detection limit of protein A assay: 0.2ng/mL All results for the monomeric IgG pool from a sodium chloride gradient to 1.5 M at ph 6.5 with phosphate concentration held at the indicated level. CHT Type I, 40 µm, 300cm/hr.

Optimize ph, capacity Dynamic binding capacity, 10% BT, CHT type I, 40 µm 5mM NaPO4, 300cm/hr 35 mg/ml 25 20 15 10 5 0 6.5 ph 7.5 mm IgG1 hpc IgG hm IgG1

Optimize ph, resolution Protein A purified monoclonal higg1 on CHT type I 20 µm All experiments in 5mM NaPO4 at 300 cm/hr Red line indicates 40 CV gradient to 2M NaCl NaCl gradient followed by cleaning with 0.5M phosphate

Optimize gradient slope Protein A purified human monoclonal IgG1, CHT type I 20 µm All experiments in 5mM NaPO4 at ph 7.0, 300 cm/hr Red lines indicate 20CV NaCl gradient traces (max. 2M) Red notations indicate linear gradient interval

Convert to step gradient Protein A purified human monoclonal IgG1, CHT type I 20 µm All experiments in 5mM NaPO4 at ph 7.0, 300 cm/hr Elution gradients 25CV (step + linear) Red lines indicate NaCl gradient traces Red notations indicate step concentration

Scale-up Scouting for aggregate resolution can be done effectively with 20 µm media in 1-2mL columns. Visual evaluation from chromatograms saves time and sample by avoiding the need for secondary testing. When the best conditions are identified, then confirm aggregate removal with HPSEC. Evaluation of IgG binding capacity and clearance of leached protein A, DNA, and endotoxin can also be done in 1-2mL columns but should use 40µm media. Scale up with 40µm media in columns with a bed height of 15-30cm.

Platform integration 3-Step platform Microfiltration Protein A affinity Virus inactivation Anion exchange flow-through mode CHT, type I, 40µm bind/elute mode Virus filtration Conc/diafiltration Microfiltration 2-Step platform Microfiltration Protein A affinity Virus inactivation CHT, type I, 40µm bind/elute mode Virus filtration Conc/diafiltration Microfiltration

3-Step platform integration Elute protein A with 0.1M glycine,* 0.05 M NaCl, ph 3.8** Hold for virus inactivation Titrate ph to 7.0** with 1M Tris EQ UNOsphere Q TM to 0.05M Tris, 0.05M NaCl, ph 7.0** Apply sample. Collect flow-through Add 0.5M NaPO4, ph 7.0** to achieve optimal phosphate concentration (1% v:v yields 5mM) Conduct virus filtration Equilibrate CHT with optimal NaPO4, ph 7.0** Load, wash, elute under optimized conditions Concentrate/diafilter to final formulation conditions * Arginine or acetate can also be used for elution. Citrate degrades CHT ** Or other ph according to scouting results

3-Step platform integration Protein A UNOsphere Q 2 3 1 2 3 S 0 1 2 4 CHT SEC 4 5 5 4 Reduced SDS PAGE fractions: S=standards, 0=original material, 1=protein A elution, 2=UNOsphere Q flow-through, 3=UNOsphere Q elution, 4=CHT monomeric IgG pool

2-step platform integration Elute protein A with 0.1M glycine,* 0.05 M NaCl, ph 3.8** Hold for virus inactivation Titrate ph to 7.0** Add 0.5M NaPO4, ph 7.0** to achieve optimal phosphate concentration (1% v:v = 5mM) Conduct virus filtration Equilibrate CHT with optimal NaPO4, ph 7.0** Load, wash, elute under optimized conditions Concentrate/diafilter to final formulation conditions * Arginine or acetate can also be used for elution. Citrate degrades CHT ** Or other ph according to scouting results

2-Step platform integration Reduced SDS PAGE (Flamingo stain) 1. 1. OM* 3 2. PA, flow-through 4 3. PA, wash (KS) 5 4. PA, pool 6 5. CHT, IgG monomer pool 7. 6. CHT, aggregate pool K KS: 1M NaCl, 2M urea, u r10mm EDTA, 0.05M PO4, ph 7.0 Sensitivity equivalent to silver stain 1 2 3 4 5 6 * IgG1 chimera, serum supplemented NS0 supernatant

Buffer tips Maintain operating ph at 6.5 or above. Avoid exposure to chelating agents. Include phosphate in all samples and buffers minimum 5mM phosphate at ph 6.5 minimum 2mM phosphate at ph 7.5 If the phosphate level required to achieve the best selectivity is too low to provide adequate buffering capacity, co-formulate with MES, Hepes, Tris, etc., but not citrate.

Column hygiene Clean: 0.5M phosphate Sanitize: 1.0M NaOH* 4 hours or more at 23 C Store: 0.1M NaOH * >15,000 hours stability at 1.0M NaOH

Acknowledgments Special thanks to Avid BioServices of Tustin, CA for generously providing cell culture supernatant to support this work.