Affi-Gel Protein A MAPS II Kit Instruction Manual

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Affi-Gel Protein A MAPS II Kit Instruction Manual Catalog Number 153-6159 For Technical Service Call Your Local Bio-Rad Office or in the U.S. Call 1-800-4BIORAD (1-800-424-6723)

Table of Contents Introduction...1 Principle...1 Comparison of IgG Recoveries...1 Kit Components...3 Additional Items Required...3 Instructions for Use...3 Sample Preparation...4 Standard Mouse IgG 1 Purification Procedure...4 Answers to Common Questions...5 References...6 Product Information...7

Introduction Principle The Affi-Gel protein A MAPS II (Monoclonal Antibody Purification System) kit provides a dramatic improvement in protein A-agarose methods for purification of mouse IgG 1 from ascites fluid. When Affi-Gel protein A agarose is combined with specially optimized MAPS II binding, elution, and regeneration buffers, protein A capacity for mouse IgG 1 from ascites fluid is 6-8 mg/ml gel. This capacity is 8-10 times higher than that obtained with published methods. 1,2 Affi-Gel protein A agarose is purified protein A coupled to crosslinked agarose beads, with an exclusion limit of greater than 10 M daltons, via chemically stable amide bonds. This coupling chemistry, plus the stability of native protein A, results in excellent resistance to denaturing agents such as urea, chaotropic salts such as guanidine hydrochloride or potassium thiocyanate, and acid and base (ph 2-11). Affi-Gel protein A agarose contains approximately 2 mg of protein A/ml gel. Protein A, from Staphylococcus aureus, has the property of binding with high specificity to the Fc region of Ig from most mammalian species. 3 When coupled to agarose beads, protein A can be used to purify IgG, to selectively remove IgG prior to analysis of other Ig classes, or to absorb immune complexes to purify antigens. 2 The affinity of IgG for protein A is not the same for all species. For this reason MAPS II buffers have been developed to optimize binding and recovery of mouse IgG 1. Comparison of IgG Recoveries Protein A-agarose preparations have been used extensively to purify IgG and IgG subclasses from a variety of mammalian species. 4 Currently, protain A-agarose is being widely used to purify monoclonal antibodies from mouse ascites fluid or culture medium supernatents. However, the usefulness of protein A-agarose in this 1

application has been limited because most mouse IgG 1 immunoglobulins have low affinity for protein A. This results in poor IgG 1 retention on protein A-agarose columns. 1,5-7 Since most mouse IgG monoclonal antibodies belong to the IgG 1 subclass, poor IgG 1 retention represents a significant purification problem. Figure 1 shows the results achieved with the Affi-Gel protein A MAPS method for the purification of several monoclonal antibodies including IgG 1, IgG 2a, and IgG 2b subclasses. Fig. 1. Comparison of IgG 1 recoveries using Affi-Gel protein A MAPS method and standard method. Mouse ascites fluid containing equivalent amounts (5 mg) of either mouse IgG 1, IgG 2a, or IgG 2b monoclonal antibodies were chromatographed in 1 ml columns of Affi-Gel protein A agarose. Chromatography was performed with the Affi-Gel protein A MAPS kit. It is evident that almost quantitative recovery was achieved in all 3 cases in which IgG 1 -containing mouse ascites was chromatographed using the MAPS kit. Improved results were also observed with IgG 2b antibodies. 2

Kit Components The Affi-Gel protein A MAPS II kit contains a sufficient quantity of reagents to purify approximately 500 mg of mouse IgG 1. Affi-Gel protein A One bottle containing 5 ml of agarose gel suspended in 0.05 M sodium phosphate, ph 7.5, with 0.05% NaN 3. Binding buffer One bottle (471 g) of buffer solids. Reconstitution volume = 1,500 ml. Elution buffer One bottle (25 g) of buffer solids. Reconstitution volume = 1,100 ml. Regeneration buffer One bottle containing 400 ml. Caution: Contains methanol. Do not mouth pipette. Column 1 x 10 cm Econo-Column chromatography column. Additional Items Required Test tubes ph meter Mixer Balance Filter Instructions for Use General purpose tubes for fraction collection are recommended. A ph meter is required to check the ph of the binding and elution buffers after reconstitution. Standard laboratory magnetic stirrer and bar for buffer mixing. Standard laboratory scale for weighing out buffer solids. 0.22 micron filter for buffer preparation. Binding Buffer Preparation The binding buffer is supplied as a premixed, preweighed solid. Reconstitution and filtration are required prior to use. Dissolve 31.4 g binding buffer solids per 100 ml distilled, deionized water. (Use the full 3

471 g for 1,500 ml.) Stir for 10 minutes. Filter through a 0.22 µ nylon filter and check the ph. The ph should be 9.0 ± 0.2. If the ph is not in this range, adjust the ph with 10 N NaOH or 6 N HCl. Store buffer solids at room temperature. Store reconstituted buffer at 4 C. If desired, sodium azide may be added to 0.05% (w/v). Elution Buffer Preparation The elution buffer is supplied as a preweighed, premixed solid. Reconstitution and filtration are required prior to use. These salts are hygroscopic. Any material in clumps should be broken up before you weigh any solids. Dissolve 2.2 g per 100 ml distilled deionized water (use the full 25 g for 1,100 ml). Stir for 10 minutes. Filter through a 0.22 µ filter and check the ph. The ph should be 3.0 ± 0.2. If the ph is not in this range, adjust the ph with 10 N NaOH or 6 N HCl. Store buffer solids at room temperature. Reconstituted buffer should be stored at 4 C, and if desired, Thimerosal bacteriostat may be added to a final concentration of one part per ten thousand. The use of sodium azide in low ph buffers is not recommended. Sample Preparation Ascites samples should be diluted one to one with binding buffer. If your sample is tissue culture supernatant, it should be concentrated to approximately 5 mg immunoglobulin/ml and then diluted one to one with binding buffer. Standard Mouse IgG 1 Purification Procedure 1. Pack a 1 x 10 cm Econo-Column chromatography column (supplied) with the desired volume of Affi-Gel protein A agarose. (One ml of Affi-Gel protein A agarose will bind 6-8 mg/ml mouse IgG 1.) 2. Equilibrate the column with 5 bed volumes of binding buffer. After equilibration, the ph of the column effluent shold be equal to the ph of the binding buffer (ph 9.0). 4

3. Apply diluted sample to the column. 4. Wash the column with 15 bed volumes of binding buffer. 5. Elute the IgG with 5 bed volumes of elution buffer. Elute column with an additional 10 volumes of buffer to insure total removal of IgG. Prolonged exposure to acid ph should be avoided. Neutralize eluate immediately after elution. For example, for a 1 ml column, collect eluate in a tube containing 1.6 ml of 1 M Tris HCl, ph 9. Sample ph under these conditions is 6 to 8. Alternatively, eluate can be dialyzed against the buffer of choice, or desalted over Bio-Gel P6DG desalting gel. See bulletin 2068 for desalting protocols. 6. Wash the column with 5 bed volumes of regeneration buffer. 7. Store the PBS containing 0.05% sodium azide. Note: For all sample sizes, short columns (10-15 cm or shorter) are recommended. The better linear flow rates obtained in short columns facilitate the washing and regeneration steps. Answers to Common Questions 1. Regeneration of column: Affi-Gel protein A agarose can be regenerated 10-12 times with the regeneration buffer supplied. We strongly recommend regenerating the column each time it is used to increase the lifetime of the gel to insure consistent separations from run to run. Crossover contamination of IgG from application to application will also be eliminated. 2. Sensitivity of antibodies to low ph: There are a few antibodies that are inactivated by low ph. Inactivation can be avoided by collecting the fraction eluted into a concentrated neutral buffer. In cases of extreme sensitivity, many immunoglobulins can be eluted at ph 4-6 by bringing up the ph of the elution buffer with 10 N NaOH. 3. Flow rate of Affi-Gel protein A agarose: 5

The flow rate will be greater than or equal to 0.6 ml/min for a 1 ml column with an ID of 1 cm and a 2:1 buffer to gel ratio. A typical sample run will take 1.0 to 1.5 hours for a one ml column. 4. Purification of IgG other than mouse with the Affi-Gel protein A MAPS II kit: Rabbit IgG from serum has been purified successfully with the Affi-Gel protein A MAPS II kit (Bio-Radiations No. 53). The protocol in this booklet can be used without modification. 5. Shelf life of the Affi-Gel protein A MAPS II kit: The shelf life of Affi-Gel protein A agarose is 1 year at 4 C. The unreconstituted buffers are good for at least 1 year when stored at room temperature. References 1. Ey, P. L., Prowse, S. J. and Jenkin, C. R., Immunochemistry, 15, 429 (1978). 2. Bigbee, W. L., Vanderlaan, M., Fong, S. S. N. and Jensen, R. H. Mol. Immunol., 20, 153 (1983). 3. Kronvall, G. and Williams, R. C., J. Immunol., 103, 828 (1969). 4. Lindmark, R., Thoren-Tolling, K. and Sjoquist, J., J. Immunol. Methods, 62, 1 (1983). 5. Kronvall, G., Grey, H. M. and Williams, R. C., J. Immunol., 105, 1116 (1970). 6. Mackenzie, M. R., Warner, N. L. and Mitchell, G. F., J. Immunol., 120, 1493 (1978). 7. Chalon, M. P., Mine, R. W. and Vaerman, J. -P., Scand. J. Immunol., 9, 359 (1979). 6

Product Information Catalog Number Product Description 153-6153 Affi-Gel Protein A Agarose, 5 ml 153-6154 Affi-Gel Protein A Agarose, 50 ml 153-6159 Affi-Gel Protein A MAPS II Kit, includes 5 ml Affi- Gel protein A, binding, elution, and regeneration buffers, and 1 x 10 cm Econo-Column chromatography column. 153-6160 Affi-Gel Protein A MAPS II Buffers, includes binding, elution, and regeneration buffers. 153-6156 Protein A, 10 mg 153-6157 Protein A, 100 mg 153-6161 Affi-Gel Protein A MAPS II Binding Buffer, 5 liters 153-6162 Affi-Gel Protein A MAPS II Elution Buffer, 5 liters 7

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