Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tools for the Vevo 2100 System

Similar documents
Vevo The Ultimate Preclinical Imaging Experience

How do drugs work? Part 1. PK: Principles & Processes. PK vs. PD. Pharmacokinetics : Basic Principles Overview. What does the body do to a drug?

Delivering top performance. Outstanding value. Diagnostic scalability. ACUSON X150 Ultrasound System.

Simple, intuitive and accessible MRI solution for preclinical research. M-Series Compact MRI Systems

Clinical Translation of Tumor Acidosis Measurements with AcidoCEST MRI

Roche Molecular Biochemicals Technical Note No. LC 10/2000

Cycles of vascular plexus formation within the nephrogenic zone of the developing mouse kidney

Detecting human circulating endothelial cells using the Attune Acoustic Focusing Cytometer

5 Contrast-Specific Imaging Techniques: Methodological Point of View

Technical Review. Real time PCR

BASIC PHARMACOKINETICS AND PHARMACODYNAMICS

An EFSUMB Introduction into Dynamic Contrast- Enhanced Ultrasound (DCE-US) for Quantification of Tumour Perfusion

Protocol for Albuwell M kit: Murine Microalbuminuria ELISA By Exocell Inc

Supplement Figure 1. Characterization of the moab. (A) A series of moabs that are anti-hαiib-specific were tested for their ability to bind to

SensoLyte Anti-alpha-Synuclein Quantitative ELISA Kit (Human/Mouse/Rat) *Colorimetric*

Syringe Pumps. Please contact us for help in selecting the best pump for your application and a free quote.

MyBioSource.com. Human VEGF ELISA Kit

Masayoshi Honda, Jeehae Park, Robert A. Pugh, Taekjip Ha, and Maria Spies

APPLICATION NOTE Rev. 7/2017, v4.0 Fluorescent Nanodiamonds: Bio-applications. Physical and Fluorescence Properties

ENDOSCOPIC ULTRASOUND CENTRE EU-ME2. Dedicated ultrasound processor with versatile functions.

Real-time 96-well antibody internalization assays using IncuCyte FabFluor Red Antibody Labeling Reagent

ab Methylated DNA Quantification Kit (Colorimetric)

Ryan C. Gessner, BS Stephen R. Aylward, PhD Paul A. Dayton, PhD. Purpose: Materials and Methods: Results: Conclusion:

MAGNETIC RESONANCE IMAGING OF IN VIVO FLOW PHENOMENA

Regina R. Reimann

SANTA CRUZ BIOTECHNOLOGY, INC.

Sus scrofa Pig genesig Speciation Kit

PROTOCOL 1850 Millrace Drive, Suite 3A Eugene, Oregon

For the quantitative detection of human IL6 in serum, plasma, cell culture supernatants and urine.

qpcr Quantitative PCR or Real-time PCR Gives a measurement of PCR product at end of each cycle real time

PI3 Kinase Assay Kit. Catalog Number KA assays Version: 05. Intended for research use only.

Histology Pattern Recognition Software in Investigative Pathology

ab MetaPath Mito Disease 4-Plex Dipstick Array

Real-Time PCR Workshop Gene Expression. Applications Absolute and Relative Quantitation

Application Note. Authors. Abstract

Time-resolved Measurements Using the Agilent Cary Eclipse Fluorescence Spectrophotometer A Versatile Instrument for Accurate Measurements

DEPArray Technology. Sorting and Recovery of Rare Cells

QImaging Camera Application Notes Multicolor Immunofluorescence Imaging

Application of Biacore Technology

3.1.4 DNA Microarray Technology

NADP+/NADPH Assay Kit

Implementation of Automated Sample Quality Control in Whole Exome Sequencing

Different Potential of Extracellular Vesicles to Support Thrombin Generation: Contributions of Phosphatidylserine, Tissue Factor, and Cellular Origin

Label-free, real-time live-cell assays for spheroids: IncuCyte bright-field analysis

Proteomics And Cancer Biomarker Discovery. Dr. Zahid Khan Institute of chemical Sciences (ICS) University of Peshawar. Overview. Cancer.

This Document Contains:

Eliminating Infusion Confusion

The science behind Betalutin : why is it unique? Roy H. Larsen PhD Sciencons AS, Oslo, Norway

Mouse ICAM-1 / CD54 ELISA Pair Set

Monitoring Of Adhesive Cure Process and Following Evaluation of Adhesive Joint Structure by Acoustic Techniques

QUANLYNX APPLICATION MANAGER

Methods of Biomaterials Testing Lesson 3-5. Biochemical Methods - Molecular Biology -

PROTOCOL. Monoamine Oxidase B Enzyme Specific Activity Assay Kit (human) MS747 Rev.0 DESCRIPTION ADDITIONAL MATERIALS REQUIRED

Mouse Factor XII Total ELISA Kit

Supplementary Figure. S1

Human VEGF-C ELISA. For the precise measurement of VEGF-C in human serum, plasma, body fluids, tissue homogenate or cell culture supernates.

Myeloma treatment algorithm 1999

Coding Essentials for Infusion and Injection Therapy Services 2018

GE Healthcare. Vivid S6. Cardiovascular ultrasound system

Physician Orders - Adult

Flow Cytometry - The Essentials

Pfizer Program in DMD. Beth Belluscio, MD-Ph.D. Pfizer Rare Disease September 9, 2017

MSD Immuno-Dot-Blot Assays. A division of Meso Scale Diagnostics, LLC.

Instant-Bands Protein Sample Loading Buffer for SDS-PAGE. User s Manual. View Protein Bands in an SDS Gel. Instantly. EZBiolab.

PTH Effects Bone Healing and Vasculogenesis in Calvaria Bone Allograft Model

64 CuCl 2 in 50 µl 0.1N NaOAc buffer, and 20 µg of each DOTA-antibody conjugate in 40 µl

GE Healthcare. EchoPAC Dimension 06. Clinical workstation

Human IgG Subclass Profile ELISA Kit

Drugs used in Thromboembolic Disease. Munir Gharaibeh, MD, PhD, MHPE Department of Pharmacology Faculty of Medicine October 2014

Dr Guy Pratt Consultant Haematologist, Heart of England NHS Foundation Trust. Natural course of myeloma. Some definitions. First relapse.

Investigation of Cell Migration using a High Density Cell Exclusion Assay and Automated Microplate Imager

Titration of Fluorochrome-Conjugated Antibodies for Labeling Cell Surface Markers on Live Cells

HELINI White spot Syndrome virus [WSSV] Real-time PCR Kit

Pharmacokinetic & Pharmacodynamic Data Analysis

Quality of Cancer RNA Samples Is Essential for Molecular Classification Based on Microarray Results Application

LATE-PCR. Linear-After-The-Exponential

Enzyme kinetics. Irreversible inhibition inhibitor is bound tightly to enzyme - very slow dissociation can be covalent or non covalently bound

Clinical Applications. ImagingRite. Neuro Intervention. 1 ImagingRite

Flow CAST : Testing Potency and Efficacy of Inhibitors of PI3K δ, PI3Kγ, BTK and SYK Activity

In vivo ultrasound biomicroscopy in developmental biology

Extrapolation of in vitro effects to in vivo embryotoxicity Basic requirements for prediction model development. Han van de Sandt, PhD

ADHESIVE CURE MONITORING WITH ACOUSTIC METHOD

Proteomics. Areas of Application for Proteomics. Most Commonly Used Proteomics Techniques: Limitations: Examples

Mouse Collagen Type III ELISA

De l'utilisation de la microscopie intravitale pour étudier la thrombose in vivo et tester de nouveaux médicaments antithrombotiques- 1er partie

RayBio Rat IL-6 ELISA Kit (For Lysates)

See external label 2 C-8 C Σ=96 tests Cat # 5201Z CARCINOEMBRYONIC ANTIGEN (CEA) ENZYME IMMUNOASSAYTEST KIT CEA ELISA. Cat # 5201Z

RayBio Human bfgf ELISA Kit

Chapter 39 PET Imaging of the Impact of Extracellular ph and MAP Kinases on the p-glycoprotein (Pgp) Activity

Automated Breast Volumes. Simplified.

SURFACE PLASMON RESONANCE-BASED SYSTEMS

Identification of red and white blood cells from whole blood samples using the Agilent 2100 bioanalyzer. Application Note

Same TaqMan Assay quality, new format

August 2017 Changes. Flow Cytometry Checklist. CAP Accreditation Program

Simple Conversion of ELISA to PerkinElmer s High Sensitivity DELFIA Technology

How to run Alpha assay: How to setup an Alpha assay Make your own assay!

Transcription:

Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tools for the Vevo 2100 System Introduction Microbubble contrast agents have been used as a method of assessing in vivo microvascular perfusion where velocities require enhanced sensitivities compared to those available in standard Doppler techniques. This highly sensitive contrast imaging technique was optimized with the development of the Vevo 2100 linear array based high-frequency ultrasound imaging system and subsequent release of Nonlinear Contrast Imaging Mode, in which an amplitude moldulation pulse sequencing scheme was implemented to retain the nonlinear microbubble signal at the fundamental frequency. The VevoCQ software builds on this highly sensitive imaging technique, allowing for advanced quantification of the Nonlinear Contrast Mode images. There are two available MicroMarker Contrast Agent products, Non-Targeted and Target-Ready MicroMarker; the former is used to enhance the visualization of the perfused microvasculature within a tissue of interest, while the latter is used to enhance the visualization of an endothelial cell surface marker, such as vascular endothelial growth factor receptor 2 (VEGFR2). The VevoCQ software provides analysis tools to aid in the quantification and visualization of key parameters for both of these MicroMarker Contrast Agents. Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 1

When working with Non-Targeted MicroMarker Contrast Agents one is typically investigating perfusion kinetics of a tissue, organ or tumor of interest. The contrast agent can be delivered by bolus injection and a time vs. intensity curve is generated. Alternatively, the contrast agent can be infused and a destructive pulse is applied and a replenishment curve is generated. Both scenarios are included within the software. Perfusion modeling is performed with both these experimental designs in which amplitude related parameters are expressed relative to echo power, time related parameters are expressed in seconds and both are combined to produce quantities relating to blood flow and dynamics. In addition, VevoCQ provides quantification of Target-Ready MicroMarker Contrast Agents to detect the binding of microbubbles to a cell surface marker within a tissue of interest. This is achieved via late phase targeted contrast enhancement imaging. Differential targeted enhancement is calculated by the VevoCQ software as an estimate of the bound contrast agent. When this value is generated for both a specific target as well as a negative control, an estimate of the relative expression for the target of interest can be assessed. Figure 1 Parametric images from destruction-replenishment perfusion model, (a) relative blood volume, (b) mean transit time, (c) relative blood flow Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 2

Background Theory This section is a brief discussion on how the VevoCQ software works and the mechanisms behind image generation. Images acquired in Nonlinear Contrast Mode on the Vevo 2100 high-frequency ultrasound imaging system are compatible with the VevoCQ software. The software analysis tool is a post-processing tool which can be applied to the data at any point after acquisition. The software is available for both the Vevo system and for the desktop workstation. Perfusion Modeling As discussed earlier, there are 2 options for perfusion modeling. Both bolus and destructionreplenishment models are included and subsequent perfusion parameters are available for quantification of contrast enhancement kinetics. Bolus Perfusion Model In this model the Non-Targeted MicroMarker Contrast Agent is delivered as a bolus injection intravenously, the perfusion model is defined as: f t O A st 2 ln( t) m 1 2 2s e 2, t 0 (1) Where O, A, m and s are fitting parameters; O is the offset, A is an amplitude parameter and m and s are the mean and standard deviation of the normally distributed natural logarithm of t, respectively. 500 450 400 ResT Linearized signal Perfusion model 350 Echo-power 300 250 200 150 WiR PE 100 O 50 RT 0 0 5 10 15 20 25 30 35 40 45 TTP Figure 2 Bolus perfusion model curve fit algorithm showing various calculated parameters mtt Time Figure 2 displays the bolus perfusion curve fit algorithm as outlined in equation 1, where Rise Time (RT), Time to Peak (TTP), Wash-in Rate (WiR) and Peak Enhancement (PE) are all Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 3

output parameters of the bolus perfusion model. The perfusion parameters are a combination of amplitude related parameters which are relative to echo-power, time related parameters and a combination of the two which are related to blood flow kinetics. Destruction-Replenishment Perfusion Model In this model the Non-Targeted MicroMarker Contrast Agent is delivered via constant infusion intravenously and then a destructive pulse is applied and the replenishment kinetics are observed. The perfusion model is defined as: t A ln m f t O 1 erf, t 0 (2) 2 s 2 Where O, A, m and s are fitting parameters, which have already been defined for equation 1. 500 450 400 Linearized signal Perfusion model 350 Echo-power 300 250 200 150 A 100 O 50 0 0 5 10 15 20 25 30 35 40 45 mtt Time Figure 3 Destruction-Replenishment perfusion model curve fit algorithm showing various calculated parameters Figure 3 displays the destruction-replenishment perfusion curve fit algorithm as outlined in equation 2, Mean Transit Time (mtt) and the A (plateau) value are all output parameters. In this model the output parameters include only relative blood volume (the plateau or A value from curve fit algorithm). Mean transit time is an absolute time measurement representing filling kinetics and relative blood flow which is a ratio of these two parameters. Targeted Contrast Imaging Target-Ready MicroMarker Contrast Agents can be conjugated to an antibody or ligand of interest to detect the expression of a target of interest, such as endothelial cell surface receptors. The VevoCQ software analysis tool allows for the quantification of late phase differential targeted enhancement. In addition, color-coded parametric images are created Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 4

for qualitative assessment of spatial distribution of the bound contrast agent. The differential targeted enhancement ( TE) is defined as: TE TE TE (3) bd ad Where TE bd and TE ad refer the targeted enhancement before and after destruction respectively. 500 450 400 s bd (t) Destruction Linearized signal Quantification Echo-power 350 300 250 200 TE TE s ad (t) 150 TE bd 100 TE ad 50 0 20 21 22 23 24 25 26 27 28 29 30 Time Figure 4 Differential targeted enhancement model showing various parameters Figure 4 displays the differential targeted enhancement model outlined in equation 3, here the s bd and s ad are simply the linearized signal before and after destruction which are used in subsequent calculations of variation within the software. Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 5

Features 1. User-defined regions of interest selection (up to 4) The ability to define multiple areas of interest allows selection and detection of anatomical regions with differing perfusion kinetics to be chosen for investigation (i.e. tumor and surrounding normal tissue or multiple areas within a tumor). Figure 5 Location of the four user defined regions of interest on the subcutaneous tumor 2. Curve fitting capabilities Three options (based on what protocol for microbubble administration is used) are available such that data is plotted and generated for both perfusion and targeted molecular imaging studies. Figure 6 Bolus perfusion model curve fit algorithm as applied to each region of interest on the subcutaneous tumor model 3. Data quantification A multitude of quantification tools are available such that data and parameters can be generated that relate to perfusion kinetics as well as molecular imaging capabilities (this is derived from the curve fittings). Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 6

Table 1 Selection of VevoCQ bolus perfusion model parametric outputs Whole Tumor (green) Bottom Right (yellow) Upper Area (pink) Bottom Left (turquoise) Peak Enhancement (a.u.) Time to Peak (sec.) 29.61 8.21 41.73 8.32 3.84 3.66 3.70 2.78 Wash-in Rate (a.u.) 15.50 4.51 22.56 6.09 Data is output in a TSV format (Excel). Table 2 Output parameters for bolus perfusion model PE Peak Enhancement [a.u] AUC Area Under the Curve, limited to peak opacification instant [a.u] RT Rise Time [s] TTP Time To Peak [s] WiR Wash-in Rate (maximum slope) [a.u] PI Perfusion Index (AUC / RT) [a.u] Table 3 Output parameters for destruction-replenishment reperfusion model rbv relative Blood Volume ( A ) [a.u] mtt mean Transit Time [s] rbf relative Blood Flow ( rbv / mtt) [a.u] 4. Parametric imaging Allows a visualize display of the intensity of perfusion kinetics and molecular signal. A B C Figure 7 Parametric images from bolus perfusion model, (a) peak enhancement, (b) time to peak, (c) wash-in rate Images and videos can be exported in a variety of formats such as TIFF, Bitmap, and WMV. Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 7

Summary The VevoCQ software is an advanced software analysis tool to be used in conjunction with the highly sensitive Nonlinear Contrast Imaging Mode available on the Vevo 2100 system. This software allows for the study of contrast uptake kinetics as well as late phase targeted enhancement. It provides advanced curve fitting algorithms for quantitative assessment of perfusion parameters as well as color-coded parametric images useful for qualitative assessment of the spatial distribution of the same parameters. The software is a postprocessing tool which can be used on numerous tissues, organs and tumor models, including subcutaneous tumors, abdominal organs and hind limb muscles. Recommended Papers Quantifying Antivascular Effects of Monoclonal Antibodies to Vascular Endothelial Growth Factor: Insights from Imaging. O Connor, JPB, RAD Carano, AR Clamp, J Ross, et al. Clin Cancer Res 15(21):6674-82, 2009. A New 15-50 MHz Array-Based Micro-Ultrasound Scanner for Preclinical Imaging. Foster, FS, J Mehi, M Lukacs, D Hirson, et al. Ultrasound Med Biol 35(10):1700-8, 2009. Inhibition of Hedgehog Signaling Enhances Delivery of Chemotherapy in a Mouse Model of Pancreatic Cancer. Olive, KP, MA Jacobetz, CJ Davidson, A Gopinathan, et al. Science 324(5933):1457-61, 2009. Sunitinib and PF-562,271 (FAK/Pyk2 inhibitor) Effectively Block Growth and Recovery of Human Hepatocellular Carcinoma in a Rat Xenograft Model. Bagi, CM, J Christensen, DP Cohen, WG Roberts, et al. Cancer Biol Ther 8(9):856-65, 2009. Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 8

VevoCQ Product Specifications Product number: VS-12176 Description: Post-processing tool for perfusion and targeted signal analysis. Perfusion parameters (including amplitude and time) derived from a curve fitting algorithm for bolus kinetics and replenishment kinetics following destruction reperfusion. Spatial rendering is available in the form of parametric maps. Data can be exported in.tiff,.bmp,.wmv files and.tsv formats. Requires Nonlinear Contrast Imaging Functionality on the Vevo 2100 system (VS-11953). Currently works with data generated with the MS200 and MS250 MicroScan TM probes. Product Brief: VevoCQ Advanced Contrast Quantification Software Analysis Tool for the Vevo 2100 Page 9