Immun-Star WesternC Chemiluminescent Kit

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Immun-Star WesternC Chemiluminescent Kit Instruction Manual For Use With Nitrocellulose and PVDF Membranes Catalog # 170-5070 For technical support, call your local Bio-Rad office, or in the US, call 1-800-4BIORAD (1800-424-6723)

IMPORTANT PRODUCT INFORMATION For best results, it is IMPORTANT to optimize all components of this kit, including sample amount, antibody concentration, blocking reagent, and choice of membrane. The antibody concentration required will be much more dilute than those used with precipitating colorimetric-hrp systems. Please perform a systematic dot blot analysis for optimization. Empirical testing is necessary to determine the optimal blocking reagent for each Western blot system. The proper blocking reagent can increase sensitivity and prevent nonspecific signal due to cross-reactivity between the antibody and the blocking reagent.

Avoid using milk as a blocking reagent when using avidin/biotin systems because milk contains variable amounts of endogenous biotin. Use sufficient volume of wash buffer, blocking reagent, antibody solution and substrate solution to cover blot and ensure that it never becomes dry. For optimal results, use a shaking platform during the incubation steps. Add Tween 20 (final concentration of 0.05%) to the blocking buffer when preparing all antibody dilutions to reduce nonspecific signal. Do not use sodium azide as a preservative for buffers. Sodium azide is an inhibitor of HRP and could interfere with this system.

Do not handle membrane with bare hands. Substrate solution is stable for 24 hours at room temperature. Exposure to sun or other intense light can harm the working solution. For best results, keep the substrate solution in an amber bottle.

Table of Contents Section 1 Preparation...1 Section 2 Assay Instructions...3 Section 3 Troubleshooting Guide..13 Section 4 Ordering Information...18

Section 1 Preparation 1.1 Introduction The Immun-Star WesternC kit provides a highly sensitive chemiluminescent substrate with the long light emission necessary for optimization of results on CCD imagers. Chemiluminescence is a chemical reaction associated with the production of light, which has become a common detection method for western blotting because of its enhanced sensitivity (mid-femtogram level of detection). In the presence of hydrogen peroxide, the horseradish peroxidase (HRP) that is conjugated to the secondary antibody catalyzes the oxidation of luminol. When oxidized luminol returns to its original state, light is produced. An enhancer is used to increase the longevity 1

and intensity of the emitted signal. When combined with a Bio-Rad Molecular Imager ChemiDoc XRS or Molecular Imager VersaDoc MP imager, the Immun-Star WesternC kit can produce clear digital images that can be easily enhanced for publication purposes. 1.2 Immun-Star WesternC Kit Products Catalog # Immun-Star Product Description 170-5070 Immun-Star WesternC Kit, includes 50 ml luminol/enhancer, 50 ml peroxide solution 170-5070S Immun-Star WesternC Kit, includes 10 ml luminol/enhancer, 10 ml peroxide solution 2

1.3 Storage and Stability Substrates should be stored at room temperature. Section 2 Assay Instructions 2.1 Working Solutions Tris-Buffered Saline (1x TBS) (20 mm Tris, 150 mm NaCl, ph 7.5) If using Bio-Rad liquid concentrate 10x TBS (catalog # 170-6435), add 100 ml of 10x TBS to 900 ml of dd water. Alternatively, phosphate buffered saline (PBS) can be used. Add 100 ml of 10x PBS (catalog # 161-0780) to 900 ml of dd water. 3

Or, to mix your own wash buffer, use the following table. 1x TBS 1x PBS For TBS (1 L) mix and For PBS (1 L) mix and dissolve: dissolve: 8 g NaCl 8 g of NaCl 0.2 g of KCl 0.2 g of KCl 3 g of Tris base 1.44 g of Na 2 HPO 4 800 ml of dd water 0.24 g KH 2 PO 4 800 ml of dd water Adjust ph to 7.5 and bring volume to 1 L with dd water. Wash Solution, (TTBS) (20 mm Tris, 150 mm NaCl, 0.05% Tween 20, ph 7.5) Add 0.5 ml Tween 20 (catalog # 170-6531) to 1 L TBS solution to make 0.05% TTBS. 4

Blocking Solution 5% nonfat dry milk in TTBS Mix 60 ml of TTBS with 3 g of nonfat dry milk (catalog # 170-6404); this is enough for one 8.5 x 13.5 cm Criterion blot. Alternatively, 3% bovine serum albumin (BSA) can also be used as a blocking solution. Primary Antibody Solution 1:1,000 1:50,000 dilution of primary antibody from a 1 mg/ml stock in TTBS. 60 ml is sufficient for one 8.5 x 13.5 cm Criterion blot. 5

Secondary Antibody Conjugate Solution The recommended secondary antibody dilution is 1:50,000 1:250,000 (1 mg/ml starting concentration) in TTBS. 60 ml is sufficient for one 8.5 x 13.5 cm Criterion blot. Substrate Solution 1:1 mixture of luminol/enhancer and peroxide buffer. 12 ml total solution (6 ml of luminol/enhancer and 6 ml of peroxide solution) is sufficient for one 8.5 x 13.5 cm Criterion blot Note: PBS can be substituted for TBS in the recipes above. 6

2.2 Detailed Assay Procedure Note: Before starting, read through the entire procedure. 1. Electrophoretic Blotting The antigens of interest are electrophoretically transferred to the membrane from a gel (i.e., SDS-PAGE gel, IEF gel, or native gel) using the Bio-Rad Trans-Blot cell (catalog # 170-3939), Mini Trans-Blot cell (catalog # 170-3930), Criterion blotter (catalog # 170-4070) or Trans-Blot SD transfer cell (catalog # 170-3940). Please refer to instruction manual provided with this equipment for proper directions. 2. Blocking Block with 5% nonfat dry milk dissolved in TTBS (0.05% Tween 20) or 3% BSA for 60 min at room temperature on a shaker. Decant blocker. 7

3. Primary Antibody Incubation Incubate the membrane with primary antibody (1:1000 1:50,000 dilution) in TTBS for 60 min at room temperature on a shaker with gentle agitation, or overnight at 4 C. 4. Wash Decant the primary antibody solution and wash with TTBS. A large volume of wash buffer with five changes is recommended. Each wash should last 10 min, with strong agitation at room temperature. The large volume of buffer with frequent changes helps to reduce background. Decant final wash solution. Using 200 ml for a 8.5 x 13.5 cm membrane is recommended. Please ensure the membrane is covered by liquid at all times. 8

5. Secondary Antibody Incubation Incubate the membrane with secondary antibody, 1:50,000 1:250,000 dilution in TTBS, for 60 min at room temperature with gentle agitation. Decant secondary antibody. Note: When using Bio-Rad Precision Plus Protein WesternC standards, we recommend diluting the StrepTactin-HRP conjugate to 1:10,000 1:50,000 for chemiluminescent detection. 9

6. Wash Wash the membrane with TTBS for 10 min with strong agitation; repeat six times using a large volume of wash buffer to help reduce background. Decant wash solution. 7. Blot Development Mix luminol/enhancer and peroxide buffer solutions in a 1:1 ratio; 0.125 ml of substrate solution/cm 2 (12 ml is sufficient for one 8.5 cm x 13.5 cm Criterion gel). Incubate the membrane in the substrate mixture for 3 to 5 min. Make sure the surface of the blot is completely covered with substrate (no air bubbles; do not allow blot to dry out). 8. Drain Take out the membrane and drain off excess substrate by touching one 10

corner of the membrane to a piece of paper towel in order to draw the excess solution off the membrane surface. Do not allow blot to dry out. Membrane can be placed in a membrane protector, such as plastic wrap, to prevent drying. Remove any bubbles between protector and membrane. 9. Camera Detection An imaging system, such as the Bio-Rad Molecular Imager ChemiDoc XRS or Molecular Imager VersaDoc MP should be used to quantitatively and qualitatively analyze protein blots. Please refer to the instruction manual for these systems for a detailed operation procedure. 11

10.Film Detection Film may be used for chemiluminescent detection, however, higher dilution of the primary and secondary antibodies may be necessary. 12

Section 3 Troubleshooting Guide Problem Probable Cause Recommended Solution No signal a) Exposure time was Increase exposure too short time b) Blot was allowed to Use heat-sealable dry after incubation bags to prevent with substrate drying of membrane c) Substrate is inactive Store reagent at proper temperature d) Primary antibody Store antibody at solution is inactive temperature, avoid bacterial contamination, heat inactivation, and repeated freeze-thaw cycles Antibody titer is too low. Increase concentration of antibody used in assay 13

Problem Probable Cause Recommended Solution e) Conjugate is inactive The concentration of the conjugate was insufficient; increase the the conjugate concentration Conjugate may be contaminated causing inactivation of antibody or enzyme Use only dd water to make solutions f) Little or no antigen is Tween 20 may bound to the wash bound antigen membrane from the membrane. Decrease amount of Tween 20 in the assay Check transfer technique, equipment, and buffer dilutions Stain membrane with protein stain, such as Ponceau S to ensure transfer efficiency 14

Problem Probable Cause Recommended Solution Weak signal a) Check all points above b) Insufficient protein Load more protein on loaded the gel c) Azide inhibits HRP Do NOT use azide to prevent bacterial contamination of solutions High background a) Exposure time was Decrease exposure too long time b) Blocking was Increase time of insufficient blocking step and/or the concentration of blocker used c) Wash stringency and Tween 20 is number of washes necessary were insufficient to help reduce background. The concentration can be increased up to 0.3%; increase number and length of washes 15

Problem Probable Cause Recommended Solution d) Secondary antibody Use the recommended was used at an dilution of conjugate excessive or determine optimal concentration dilution experimentally e) Contamination Refer to blotting occurred apparatus instruction during transfer manual for recommendations f) Solutions and buffers Autoclave or sterile are contaminated filter dd water prior to making solutions Use blotting-grade nonfat dry milk for blocking. This product has been QC tested for acceptable background temperatures Avoid bacterial contamination of all solutions by storing at the appropriate temperatures 16

Problem Probable Cause Recommended Solution Signal too a) Protein is overloaded Load less protein in strong the gel b) Antibody is too Optimize antibody concentrated solution; see page 4 for recommendations c) Incorrect gel running Check gel and buffer and blotting recipes, optimize conditions conditions d) Inappropriate Decrease the incubation time with incubation time substrate 17

Section 4 Ordering Information Catalog # Description 170-5070 Immun-Star WesternC Kit, includes 50 ml luminol/enhancer, 50 ml peroxide solution 170-5070S Immun-Star WesternC Kit, includes 10 ml luminol/enhancer, 10 ml peroxide solution Electrophoresis/Blotting Products 161-0376 Precision Plus Protein WesternC Standards, 250 µl 161-0380 Precision Plus StrepTactin-HRP Conjugate, 0.3 ml 170-5047 GAM-HRP Conjugate, 2 ml 170-5046 GAR-HRP Conjugate, 2 ml 170-6404 Blotting-Grade Blocker, nonfat dry milk, 300 g 18

Catalog # Description 170-6435 10x Tris Buffered Saline, 1 L 161-0780 10x Phosphate Buffered Saline, 1 L 170-6531 Tween 20, EIA grade, 100 ml 170-3939 Trans-Blot Cell With Plate Electrodes and Super Cooling Coil 170-3930 Mini Trans-Blot Electrophoretic Transfer Cell 170-4070 Criterion Blotter With Plate Electrodes 170-3940 Trans-Blot SD Semi-Dry Electrophoretic Transfer Cell Molecular Imager Products 170-8650 Molecular Imager VersaDoc MP 5000 System 170-8070 Molecular Imager ChemiDoc XRS System, PC 170-8071 Molecular Imager ChemiDoc XRS System, Mac 19

Catalog # Description Blotting Membranes Nitrocellulose Membranes, (0.45 µm) 162-0113 Sheets, 20 x 20 cm, 5 162-0114 Sheets,15 x 9.2 cm, 10 162-0115 Roll, 30 cm x 3.5 m, 1 162-0116 Sheets, 15 x 15 cm, 10 162-0117 Sheets, 9 x 12 cm, 10 162-0145 Sheets, 7 x 8.4 cm, 10 162-0148 Sheets, 11.5 x 16 cm, 10 162-0214 Nitrocellulose/Filter Paper Sandwiches, 7 x 8.5 cm, 20 162-0215 Nitrocellulose/Filter Paper Sandwiches, 7 x 8.5 cm, 50 162-0234 Nitrocellulose/Filter Paper Sandwiches, 8.5 x 13.5 cm, 20 162-0235 Nitrocellulose/Filter Paper Sandwiches, 8.5 x 13.5 cm, 50 20

Catalog # Description Nitrocellulose Membranes, (0.2 µm) 162-0112 Roll, 30 cm x 3.5 m 162-0146 Sheets, 7 x 8.4 cm, 10 162-0147 Sheets, 13.5 x 16.5 cm, 10 162-0150 Sheets, 20 x 20 cm, 5 162-0212 Nitrocellulose/Filter Paper Sandwiches, 7 x 8.5 cm, 20 162-0213 Nitrocellulose/Filter Paper Sandwiches, 7 x 8.5 cm, 50 162-0232 Nitrocellulose/Filter Paper Sandwiches, 8.5 x 13.5 cm, 20 162-0233 Nitrocellulose/Filter Paper Sandwiches, 8.5 x 13.5 cm, 50 Immun-Blot PVDF Membranes, (0.2 µm) 162-0174 Sheets, 7 x 8.4 cm, 10 162-0175 Sheets, 10 x 15 cm, 10 162-0176 Sheets, 20 x 20 cm,10 162-0177 Roll, 26 cm x 3.3 m, 1 21

Catalog # Description 162-0218 Immun-Blot Membrane/Filter Paper Sandwiches, 7 x 8.5 cm, 20 162-0219 Immun-Blot Membrane/Filter Paper Sandwiches, 7 x 8.5 cm, 50 162-0238 Immun-Blot Membrane/Filter Paper Sandwiches, 8.5 x 13.5 cm, 20 162-0239 Immun-Blot Membrane/Filter Paper Sandwiches, 8.5 x 13.5 cm, 50 Chemiluminescent Substrate technology is protected by Patent No. 6,432,662. Tween is a trademark of ICI Americas, Inc. Strep-tag and StrepTactin are trademarks of Institut für Bioanalytik GmbH. Strep-tag technology for western blot detection is covered by US patent 5,506,121, and by UK patent 2,272,698. StrepTactin is covered by German patent application P 19641876.3. Bio-Rad Laboratories, Inc. is licensed by Institut für Bioanalytik GmbH to sell these products for research use only. 22

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