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DNA: The Genetic Material Chapter 14 Genetic Material Frederick Griffith, 1928 Streptococcus pneumoniae, a pathogenic bacterium causing pneumonia 2 strains of Streptococcus: - S strain virulent - R strain nonvirulent Griffith infected mice with these strains 2 1

Griffith s results: - live S strain cells killed mice - live R strain cells did not kill mice - heat-killed S strain cells did not kill mice - heat-killed S strain + live R strain cells killed mice 3 Griffith s conclusion: Genetic Material - information specifying virulence passed from dead S strain cells into live R strain cells - Griffith: transfer of information transformation 4 2

Genetic Material Avery, MacLeod, & McCarty, 1944 repeated Griffith s experiment using purified cell extracts & discovered: - removal of all protein from transforming material did not destroy its ability to transform R strain cells - DNA-digesting enzymes destroyed all transforming ability - transforming material DNA 5 Hershey & Chase, 1952 Genetic Material - investigated bacteriophages: viruses that infect bacteria - bacteriophage composed of only DNA & protein - to determine which of these molecules is genetic material injected into bacteria 6 3

- Bacteriophage DNA labeled phosphorus ( 32 P) - Bacteriophage protein labeled sulfur ( 35 S) - radioactive molecules tracked -only bacteriophage DNA ( 32 P) entered bacteria & used to produce more bacteriophage - conclusion: DNA genetic material 7 DNA: nucleic acid. DNA Structure Building blocks of DNA: nucleotides, each composed of: 5-carbon sugar called deoxyribose phosphate group (PO 4 ) nitrogenous base adenine, thymine, cytosine, guanine 8 4

9 DNA Structure Nucleotide structure consists of nitrogenous base attached to the 1 carbon of deoxyribose phosphate group attached to the 5 carbon of deoxyribose free hydroxyl group (-OH) at the 3 carbon of deoxyribose 10 5

DNA Structure Nucleotides connected to each other to form long chain phosphodiester bond: bond between adjacent nucleotides formed between phosphate group of 1 nucleotide & 3 OH of next nucleotide Chain of nucleotides 5 to 3 orientation 11 DNA Structure Determining the 3-dimmensional structure of DNA involved the work of a few scientists: Erwin Chargaff determined that amount of adenine = amount of thymine amount of cytosine = amount of guanine This is known as Chargaff s Rules 12 6

DNA Structure Rosalind Franklin & Maurice Wilkins Franklin performed X-ray diffraction studies to identify 3-D structure discovered DNA is helical discovered molecule has a diameter of 2 nm & makes a complete turn of helix every 3.4 nm 13 DNA Structure James Watson & Francis Crick, 1953 deduced structure of DNA using evidence from Chargaff, Franklin & others proposed a double helix structure 14 7

Double helix consists of: DNA Structure 2 sugar-phosphate backbones nitrogenous bases toward interior of molecule bases form hydrogen bonds with complementary bases on opposite sugarphosphate backbone 15 16 8

DNA Structure Two strands of nucleotides antiparallel to each other one oriented 5 to 3, other 3 to 5 Two strands wrap around each other to create the helical shape of molecule 17 18 9

DNA Replication Matthew Meselson & Franklin Stahl, 1958 investigated process of DNA replication considered 3 possible mechanisms: conservative model semiconservative model dispersive model 19 20 10

DNA Replication Bacterial cells were grown in a heavy isotope of nitrogen, 15 N all the DNA incorporated 15 N cells were switched to media containing lighter 14 N DNA was extracted from the cells at various time intervals 21 DNA Replication DNA from different time points analyzed for ratio of 15 N to 14 N it contained After 1 round of DNA replication, DNA consisted of a 14 N- 15 N hybrid molecule After 2 rounds of replication, DNA contained 2 types of molecules: half DNA was 14 N- 15 N hybrid half DNA was composed of 14 N 22 11

23 DNA Replication Meselson & Stahl concluded mechanism of DNA replication: semiconservative model Each DNA strand acts as a template for synthesis of a new strand 24 12

The Nature of Genes Central dogma of molecular biology states that information flows in one direction: DNA RNA protein Replication: DNA DNA Transcription: DNA RNA Translation: RNA protein 25 DNA Replication DNA replication includes: initiation replication begins at an origin of replication elongation new strands of DNA are synthesized by DNA polymerase termination replication terminated differently in prokaryotes & eukaryotes 26 13

Eukaryotic DNA Replication Larger size & complex packaging of eukaryotic chromosomes means they must be replicated from multiple origins of replication Enzymes of eukaryotic DNA replication more complex than those of prokaryotic cells 27 Eukaryotic DNA Replication Synthesizing ends of chromosomes difficult because of lack of a primer With each round of DNA replication, linear eukaryotic chromosome becomes shorter 28 14

29 Eukaryotic DNA Replication telomeres repeated DNA sequence on ends of eukaryotic chromosomes produced by telomerase telomerase contains an RNA region that is used as a template so a DNA primer can be produced 30 15

31 DNA Repair - DNA-damaging agents - repair mechanisms - specific vs nonspecific mechanisms 32 16

DNA Repair Mistakes during DNA replication can lead to changes in DNA sequence & DNA damage DNA can also be damaged by chemical or physical agents called mutagens Repair mechanisms: correct these problems 33 DNA Repair DNA repair mechanisms can be: specific targeting a particular type of DNA damage photorepair of thymine dimers non-specific able to repair many different kinds of DNA damage excision repair to correct damaged or mismatched nitrogenous bases 34 17

35 36 18