Unlocking protein production with translational read-through for rare genetic diseases. Investor Presentation February 2018

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Unlocking protein production with translational read-through for rare genetic diseases Investor Presentation February 2018 1

Forward-Looking Statements Certain statements included in this presentation are forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995. These include statements of management s intentions, belief, plans and future expectations and, therefore, you are cautioned not to place undue reliance on them. Such forward-looking statements involve risks and uncertainties and actual results could differ materially from any forward-looking statements expressed or implied herein. The risks and uncertainties that could result in actual results to differ materially from those forward-looking statements express or implied herein include, but are not limited to: the Company's ability to continue as a going concern; the ability of the Company to consummate additional financings; the development of the Company's technology; the approval of the Company's patent applications; the Company's ability to successfully defend its intellectual property or obtain the necessary licenses at a cost acceptable to the Company, if at all; the successful implementation of the Company's research and development programs and collaborations; the success of the Company's license agreements; the timing and success of the Company's preliminary studies, preclinical research, clinical trials and related regulatory filings; if approved, the acceptance by the market of the Company's products and the continued quotation of the Company's common stock on the over-the-counter securities market, as well as other factors expressed from time to time in the Company s 10-K, 10-Qs and other filings with the SEC. The forward-looking statements contained herein are made only as of the date of this presentation, and the Company undertakes no obligation to publicly update such forwardlooking statements to reflect subsequent events or circumstances. 2 2

Eloxx Pharmaceuticals Highlights Leading Read Through Company Experienced Management Clinical stage biopharmaceutical company developing novel small molecule medicines designed to treat genetic diseases by restoring the production of proteins from genes with nonsense mutations Management team with established track record of successful product development and commercialization Strong Clinical Focus Diversified Development Portfolio On track for mid 2018 IND (FDA) and CTA (Belgium) submission to support initiation of Phase 2 studies in Cystinosis and Cystic Fibrosis in 2018. Phase 1 SAD complete, MAD ongoing. Global rights for library of novel molecules that address the aminoglycoside/ribosome binding site. Anticipate advancing second compound to IND enabling studies in 2018. Financially Sound Completed $38M Series C financing at the end of 4Q 2017 Extensive IP portfolio; Composition of matter thru 2031 Trading as ELOX 3 3

Highly Experienced Leadership Team Robert Ward Chairman and CEO Pedro Huertas, MD, PhD CMO Gregory Weaver CFO John van Duzer, Ph.D. VP CMC Barbara Ryan Neil Sharpe, Ph.D. Investor Relations VP Translational Sci. 4 4

The Promise of Read-Through Aminoglycosides first showed read-through activity in nonsense mediated diseases Aminoglycosides tolerability profile has limited suitability for read through treatment of serious genetic diseases Advances in our understanding of translational read-through enables design of novel small molecules 5

Target Profile for Read-Through Eloxx read-through program is pursuing product candidates with the following characteristics: Activity independent of gene size or complexity of genetic disorder Molecular scaffold with defined ribosomal effect Active at all three premature stop codons Reduces rate of nonsense mediated decay Restores protein production to a clinically significant level Acceptable tolerability profile Suitable for chronic administration 6

Aminoglycoside Ribosomal Interaction Well defined molecular interaction with helix 44 Role in stabilization of trna binding at Site A Optimizing scaffold by altering interaction with prokaryotic and mitochondrial ribosomes Defined tissue penetration and tolerability profile for read-through applications Aminoglycoside activity observed on single pre-translocation ribosome complexes. Feldman, MB; Terry DS; Altman RB; Blanchard SC. Nature Chemical Biology volume6, pages54 62 (2010) 7

Discovery of ELX-02 ü Novel compounds derived from aminoglycoside scaffold ü Screened for read-through activity on known disease related nonsense mutations ü Reduced mitochondrial inhibition (range 12-140X) ü Reduced prokaryotic ribosomal inhibition Increased Selectivity towards Cytoplasmic versus Mitochondrial Ribosome Confers Improved Efficiency of Synthetic Aminoglycosides in Fixing Damaged Genes: A Strategy for Treatment of Genetic Diseases Caused by Nonsense Mutation. Kandasamy, K; Atia-Gilkin D; et al. J Med Chem (2012) 55(23):10630-10643 8

ELX-02 Preclinical Development IND Enabling Studies Functional and anatomic hearing studies No observation of ototoxicity Histopathology and functional renal studies Indication of improved NOAEL margin Currently anticipate dosing without adjustment for renal impairment On track for mid-year submission Initiated regulatory pre-ind review of CMC to support planned clinical program 9

ELX-02 Clinical Development ClinicalTrials.gov Identifier: NCT03292302 Completed A Phase 1a, Randomized, Doubleblinded, Placebo-Controlled, Single Dose Escalation Study to Evaluate the Safety, Tolerability, and Pharmacokinetics of ELX-02 in Healthy Adult Volunteers To Date: No SAE Observed No renal or otoacoustic SAE Generally well tolerated ClinicalTrials.gov Identifier: NCT03309605 Ongoing A Phase 1, Randomized, Double- Blinded, Placebo-Controlled, Third Party Open, Multiple Dose Escalation, Single Center Study to Evaluate the Safety, Tolerability and Pharmacokinetics of Subcutaneously Administered ELX- 02 in Independent Consecutive Cohorts of Healthy Subjects Planned Enrollment 45 10

Cystinosis Development Program Ultra-rare lysosomal storage disease Caused by mutations in cystinosin (CTNS) Cysteine efflux channel Cystine lysosomal accumulation causes manifestations of disease It is generally recognized that the current standard of care (cysteamine administration) stimulates alternative transport pathway W138X most common nonsense mutation represents 1/3 of patient population ELX-02 currently available data indicate the potential to: ü Increase translational read-through ü Reduce NMD ü Restore CTNS mrna to near normal levels ü Lower cystine accumulation in vitro and in vivo 11

ELX-02 Preclinical Cystinosis In vitro model indicates ELX-02 reduces nonsense mediated decay (NMD) in vitro model CTNS W138X/W138X fibroblasts In vitro model indicates ELX-02 restores Cystinosin transporter function 12

ELX-02 Animal Model Cystinosis CTNS Y226X/Y226X knock-in DrPaul Goodyer McGill University 21 Days of Biweekly ELX-02 Administration Significantly Reduced Kidney Cystine Levels 13

ELX-02 Cystinosis Next Steps Ö Dec 2017 Pre-IND FDA Discussion On track for mid-2018 IND Submission in US Targeting 4Q 2018 for FPFV Phase 2 Study 14

Cystic Fibrosis Development Program Systemic rare disease Caused by mutations in transmembrane conductance regulator (CFTR) Chloride channel Mutations lead to dysregulation in multiple organ systems Current standard of care based on molecular chaperones for trafficking and conformation G542X most common nonsense mutation represents 5% of patient population ELX-02 currently available data indicates the potential to: ü Increase translational read-through ü Improve chloride currents in HBEs and organoids ü Demonstrate synergy with correctors and potentiators in heterozygous population Zoltan Bozoky et al. PNAS 2013;110:47:E4427-E4436 15

Cystic Fibrosis CFTR Molecular Defect Premature stop codons or nonsense mutations are Class 1 There are currently no approved therapies for Class 1 G542X represents approximately 5% of the total CF patient population Eloxx s development path for read-through therapeutics will be focused on the patient subset with diagnosed nonsense mutations Novel personalized therapies for cystic fibrosis: Treating the basic defect in all patients. Journal of Internal Medicine 277(2) September 2014 16

Goals of Cystic Fibrosis Personalized Medicine Approach Development path focused on individual s genetic background (ie, CFTR mutation) Today most patients have genetic sequence data that could enable personalized treatment 17

First 6 patients successfully treated based on organoid diagnosis. Cystic Fibrosis: First Organoid Clinical Success Our first patient in 2014 CF patient 18 23

Organoids For Cystic Fibrosis Screening A CF assay on cystic fibrosis patient organoids Healthy CFTR activation: Swelling of Organoids CF mutated CFTR activation: No-Swelling of Organoids 19 11/13/2017 Confidential 24

Organoids Pre-clinical Patient Stratification Can Be Used To Define Clinical Trial Populations A CF swelling assay on cystic fibrosis patient organoids Patient Organoid without drug treatment: No Swelling of Organoids Patient Organoid with drug treatment: Swelling of Organoids 20 11/13/2017 Confidential 25

ELX-02 Example Organoid Results 21

ELX-02 Cystic Fibrosis Next Steps Ö Jan 2018 Pre-CTA (Belgium) Regulatory Meeting On track for mid-2018 CTA (Belgium) Submission Targeting 4Q2018 for FPFV Phase 2 Study 22

Our Current Development Pipeline 2017 2018 2019 2020 ELX-02 Phase 1a Phase 1b MAD Cystic Fibrosis Cystinosis Submission CTA (Belgium) IND (FDA) Phase 2 ELX Library Compounds Preclinical Mutational Profiling Candidate Nomination ELX-02 and the ELX Library Compounds are investigational agents and have not been approved for use by any regulatory agency 23

Eloxx Pharmaceuticals Highlights March 20 FY2017 Earnings Call Suntrust 4 th Annual Orphan Drug Day Feb 13, 2018 Cowen 38 th Annual Health Care Conference March 12, 2018 24 24

Thank you! 25 25