Procedures. Blood Collection in Conscious Blood Collection in Conscious Mice. Perfusion and Tissue Collection in

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Procedures In this section of the protocol, you will provide details about all the procedures that will be performed on the animals you are using. You have two options for adding procedures, either Pre-filled Procedures or Custom Procedure. We also describe how to Clone a Custom Procedure and provide General Notes about all Procedures in this Guide. For some types of Custom Procedures, there may be ACUC-approved procedure descriptions available on the web site, http://www.olac.berkeley.edu/pi-resources/pre-approved-procedures. 1) Pre-filled Procedure are auto-populated with ACUC-approved procedure descriptions and procedural steps. There are several types of Pre-filled Procedures, listed below. Procedure Category Procedure Type Procedure Title Rodent Blood & Tissue Blood Collection in Anesthetized Blood Collection in Anesthetized Mice Collection Procedures Mice Blood Collection in Anesthetized Blood Collection in Anesthetized Rats Rats Blood Collection in Conscious Blood Collection in Conscious Mice Mice Blood Collection in Conscious Rats Blood Collection in Conscious Rats Perfusion and Tissue Collection in Mice Vascular Perfusion with Fixation and Tissue Collection in Mice Perfusion and Tissue Collection in Rats Vascular Perfusion with Fixation and Tissue Collection in Rats Rodent Breeding Procedures Identification of Anesthetized Identification of Anesthetized Mice Mice Identification of Anesthetized Rats Identification of Anesthetized Rats Identification of Conscious Mice Identification of Conscious Mice Identification of Conscious Rats Identification of Conscious Rats Rodent Compound Administration Procedures Compound Administration Compound Administration in Conscious Mice (PO, SC, IP, IM, IV) Compound Administration Compound Administration in Conscious Rats (PO, SC, IP, IM, IV) Compound Administration Under Anesthesia Compound Administration in Anesthetized Mice (ID, HGD, RO & IV) Compound Administration Under Anesthesia Compound Administration in Anesthetized Rats (ID, RO, HGD) Osmotic Pump Implantation in Mice Osmotic Pump Implantation in Mice Osmotic Pump Implantation in Rats Osmotic Pump Implantation in Rats Rodent Diagnostic Procedures Imaging of Animals in Mice Imaging Mice (IVIS, Ultrasound, MRI, EchoMRI, & Fluorescence) Imaging of Animals in Rats Imaging Rats (IVIS, Ultrasound, MRI, & Fluorescence) Berkeley eprotocol IACUC Quick Guide Procedures Page 1 of 17

Procedure Category Procedure Type Procedure Title Rodent Disease Models Antibody Production Immunizations for Antibody Production in Mice Tumor Induction/Passage in Anesthetized Mice Tumor Cell Injection in Anesthetized Mice (SC, IP, IV, RO) Tumor Induction/Passage in Anesthetized Rats Tumor Cell Injection in Anesthetized Rats (SC, IP, IV) Tumor Induction / Passage in Tumor Cell Injection in Conscious Mice Conscious Mice Tumor Induction / Passage in Conscious Rats (SC, IP, IV) Tumor Cell Injection in Conscious Rats (SC, IP, IV) a. To add a Pre-filled Procedure to your protocol, go to the Protocol Information, Procedures section of the protocol, select the Pre-filled radial button and click Add. Select Pre-filled then Add to create a new pre-filled procedure. Berkeley eprotocol IACUC Quick Guide Procedures Page 2 of 17

b. Using the drop-down menu, select the Procedure Category, referring to the table above for guidance: c. Using the drop-down menu, select the Procedure Type, referring to the table above for guidance: Berkeley eprotocol IACUC Quick Guide Procedures Page 3 of 17

d. Using the drop-down menu, select the Pre-filled Procedure Title: e. The Species and Pain/Distress Category will auto-populate based on the procedure: Berkeley eprotocol IACUC Quick Guide Procedures Page 4 of 17

f. You can edit or change the Pain/Distress Category for the procedure, but the Species is fixed, depending on the Procedure Type you selected. g. Complete all the other information on the Procedure Details, including the maximum number of animals to be used in this procedure for a THREE-YEAR period, use location and, for procedures involving category D or E pain and distress levels, check Yes, a veterinarian was consulted (a veterinarian will review the protocol). h. Click Save. The Procedure Details tabs will appear and will need to be completed. i. At this time, you can edit the Pre-filled Procedure Title. You should do this if you intend to add more than one of the same Pre-filled Procedure Titles. i. Carefully read all the instructions under Procedure Description. You can edit this information if needed, but keep in mind that existing content has been approved by the ACUC. All changes made will be tracked for reviewers. Carefully read the instructions under Procedure Description. Edit if needed. All changes made are tracked for reviewers. Berkeley eprotocol IACUC Quick Guide Procedures Page 5 of 17

j. Under Procedural Steps, select the box for those steps or methods you will NOT be using and click Delete. There can be several methods described, so carefully read all the content. Select the box for those steps or methods you will NOT be using and click Delete. To edit the Step Description, click on the link to the Step Name. All changes made are tracked for reviewers. k. To edit the Step Description, click on the link to the Step Name. Save your changes. Keep in mind that the existing content has been approved by the ACUC. Any changes you make will be tracked for reviewers. All changes you make the Procedure Steps will be visible once you Save the Procedure. Berkeley eprotocol IACUC Quick Guide Procedures Page 6 of 17

l. Review the auto-populated content in the remaining questions on the Procedure Description tab, and be sure to answer the question, How does this procedure fit into or address your overall research goals? Answer the question, How does this procedure fit into or address your overall research goals? Review all the auto-populated content in the remaining questions, and edit as needed. All changes made will be tracked for reviewers. Berkeley eprotocol IACUC Quick Guide Procedures Page 7 of 17

m. To save the procedure and keep it open for editing, click the blue Save Procedure button within the Procedure Description. To save the procedure and close the procedure, click the Save link in the grey border Click Save to save and close the procedure. Click Save Procedure to save and keep the procedure open. n. Review all the other procedure details tabs. There will be auto-populated content in other tabs, depending on the procedure type. Review and complete all other Procedure Details tabs. Berkeley eprotocol IACUC Quick Guide Procedures Page 8 of 17

o. If you are using Anesthesia, open the Anesthetic Regimen tab, Add an Anesthetist, review the parameters monitored during anesthesia, describe the anesthetic recordkeeping methods, and review the anesthetic agents. All changes made will be tracked for reviewers. p. There are several Anesthetic Agent options auto-populated. Delete any you will not be using by clicking on the box next to the agent, and clicking the Delete link. Add all personnel who will be performing anesthesia for this procedure. Carefully review Parameters that will be monitored. Make edits if needed. Describe Anesthetic Recordkeeping Methods. Carefully read Anesthetic Doses. Edit, Delete or Add as needed. Add Paralytic Agents or Other Pre-medications if used. Berkeley eprotocol IACUC Quick Guide Procedures Page 9 of 17

q. If you will be administering any material or agent to the animals as a part of this procedure (other than Anesthetic or Analgesics already described), open and complete the Other Agents Utilized tab. Add all materials or agents administered as a part of this procedure. r. Once you save and close a pre-filled procedure, it will appear on the Procedures list page, and will be identified as a pre-filled procedure: s. PLEASE NOTE: The Clone function is not available for Pre-filled Procedures, only for Custom Procedures. Berkeley eprotocol IACUC Quick Guide Procedures Page 10 of 17

2) Custom Procedure do not include any auto-populated content. There are several types of custom procedures that you can add, and selecting the correct type of procedure is important since this dictates the questions the Investigator must respond to when describing the procedure. For some types of Custom Procedures, there may be ACUC-approved procedure descriptions available on the web site, http://www.olac.berkeley.edu/pi-resources/pre-approvedprocedures. The Custom Procedure Types are listed below: Animal Identification Antibody Production Behavior Study Assay Blood Collection Breeding & Genotyping Compound/Drug Administration Experimental Neoplasia/Tumor Passage Field Studies Imaging Infectious Disease Study Irradiation/Reconstitution Neurobiological Recording Nutritional Study Surgery at Vendor Surgical Procedure Treadmill/Locomotion Other (describe) a. To add a custom procedure to your protocol, go the Protocol Information, Procedures section of the protocol, select the Custom radial button and click on the Add link. Select Custom and click Add to create a new custom procedure. b. You can also select an existing custom procedure and Clone it. Cloning is helpful if you are doing the same procedure on multiple species. i. PLEASE NOTE: The Clone function is not available for Pre-filled Procedures, only for Custom Procedures. ii. To clone an existing custom procedure, select the box next to the procedure you wish to clone and click the Clone link (see screen shot below). iii. If you Clone a procedure, you will need to give the new procedure a unique Procedure Title. Berkeley eprotocol IACUC Quick Guide Procedures Page 11 of 17

To Clone an existing Custom Procedure, select it, then click Clone. c. After you click Add or Clone, a Procedure Details section will appear: After you click Add or Clone, a Procedure Details section will open. Berkeley eprotocol IACUC Quick Guide Procedures Page 12 of 17

3) Select the Procedure Type from the drop-down menu, or select Other and describe. Select Procedure Type and type in a distinct Procedure Title. 4) Complete the Procedure Title, distinguishing each procedure. For example, if you will be doing several types of Surgical Procedures, use the title to distingue one surgical procedure from another. This is helpful to both reviewers and researchers, so they can easily drill-down to the details of the different procedures in the protocol. 5) Select the species from the drop-down menu, which includes all the species you added previously in the Species section of the protocol. 6) The Pain and Distress Category automatically selects a default setting based on the Procedure Type selected. You can change the default setting, however, the official Pain and Distress Category will be determined by the ACUC during the review process. d. The Pain and Distress Category is required for regulatory reporting purposes and uses a scale developed by the United States Department of Agriculture (USDA), the agency that administers the Animal Welfare Act Regulations. i. Category B: Animals that will be bred or purchased for breeding, but not used for experiments. This includes: breeders young that cannot be used because of improper genotype or gender any other animals that will not have any research procedures performed on them or participate in research studies Note: If tail snips are necessary for genotyping, this category is not appropriate. ii. Category C: Animals that will undergo procedures that involve no or only very brief pain or distress, with no need for or use of pain relieving drugs. Examples include: observational studies most intravenous and parenteral injections of non-irritating agents most blood collections from peripheral vessels collection of cells and/or tissues from animals after euthanasia has been performed Berkeley eprotocol IACUC Quick Guide Procedures Page 13 of 17

iii. Category D: Animals that will undergo procedures involving potential pain or distress that is relieved by appropriate anesthetics, sedatives, or analgesics. Examples include: major and minor surgery performed under anesthesia (survival or non-survival) tissue or organ collections prior to euthanasia painful procedures performed under anesthesia (such as retro-orbital blood collection in rodents) prolonged restraint accompanied by tranquilizers or sedatives experiments involving infectious or other hazardous materials in animals that have provisions for immediate euthanasia if they become sick to effectively prevent pain and/or suffering. Note: If an endpoint is used that involves significant pain or distress, consideration should be given to putting animals into Category E. iv. Category E: Animals that will undergo procedures in which pain or stress is NOT relieved with the use of anesthetics, analgesics, tranquilizers, or by euthanasia. Examples include: studies in which animals are allowed to die without intervention (e.g., LD50, mortality as an end-point) studies that allow endpoints that are painful or stressful addictive drug withdrawals without treatment pain research or noxious stimulation 7) Complete the maximum number of animals to be used in this procedure for a three-year period. 8) Federal regulations require that you consult a veterinarian when designing activities which involve painful or potentially painful studies (Category D or E). If you have added a Category D or E procedure, you will be asked to certify that you have consulted with one of the OLAC veterinarians. Click Yes in response to this questions since a veterinarian will be reviewing the protocol. 9) Complete the Procedure Site Information, including the building and room number. e. This information is used to determine if the space is approved by the ACUC for the procedure listed and to assist the ACUC in fulfilling its regulatory obligation to inspect all areas where animals are used. NOTE: If you change the location where you perform a procedure, you must amend your protocol so the Procedure Site information is up-to-date. f. If you are performing the same procedure in multiple locations, you will need to add a separate procedure for each location. You can create one procedure and Clone it to change the procedure site. g. If you are conducting field studies, select Use Location: Field Study, Building: Other, and type NA into the Building and Room fields. You will provide more detail about where your field studies are conducted later in the procedure description. 10) When you have completed all the required Procedure Details information, click the Save button. Berkeley eprotocol IACUC Quick Guide Procedures Page 14 of 17

11) Depending on the Procedure Type selected, additional questions will appear in blue tab format under the Procedure Details. Click Save to save and close the procedure. Complete each Procedure Details tab. Click Next to save and move to the next tab. Click Save Procedure to save and keep the procedure open. h. Complete all required and applicable questions on each tab for each procedure. All questions marked with a red asterisks (*) must be completed before moving on. i. Click on the Next button under the Procedure Detail tabs to save your work and move to the next tab. j. If a question is not applicable, please type Not Applicable or NA rather than leaving it blank. 12) Repeat steps 2-11 to add every procedure to your protocol. eprotocol will build a table in the Procedure Section of the Protocol that lists all of your procedures. k. To edit a procedure, click on the Procedure Type link. l. To delete or clone a procedure, select the box next to the procedure and click Delete or Clone. To edit, click on the Procedure Type link. To delete or clone, select the box next to the procedure, then click Delete or Clone. Berkeley eprotocol IACUC Quick Guide Procedures Page 15 of 17

3. General Notes about all procedures: c. NAVIGATION TIPS: At this stage of the protocol, there are multiple navigation tools for saving and proceeding. i. The Next and Save links below the blue Procedure Details Tabs save each tab for that procedure. ii. The Save link next to the words, Procedure Details, will save and close that procedure. iii. The Next and Previous links at the top right-hand side of the page will save and move you to the next section of the protocol (e.g., Funding Sources or Certifications). iv. The Save and Close links at the top right-hand side of the page will save and close the protocol itself. Save and Close the protocol. Move to the Next or Previous section of the protocol Click Save to save and close this procedure. Click Next to save this Procedure Details tab and move to the next tab for this procedure. Click Save Procedure to save this procedure and keep it open. d. If you add more than one procedure, you must complete the Procedure Relationships section. This section describes your studies (which consist of multiple procedures), the sequence and timing of the procedures, and how many and which procedures a single animal will undergo. See the eprotocol Quick Guide on Procedure Relationships. Berkeley eprotocol IACUC Quick Guide Procedures Page 16 of 17

e. If you add a potentially painful or distressful procedure (see Pain and Distress Category, above), you must complete the Alternatives Search section, describing in detail how you performed a literature search for alternatives to the procedure. See the eprotocol Quick Guide on Alternatives Search. If you add a painful/distressful procedure, Alternative Search appears. If you add more than one procedure, Procedure Relationships appears. f. If you are performing the same procedure on different species, you will need to add a separate procedure for each species. Berkeley eprotocol IACUC Quick Guide Procedures Page 17 of 17