Worksheet: Mutations Practice

Similar documents
GENETICS and the DNA code NOTES


Materials Protein synthesis kit. This kit consists of 24 amino acids, 24 transfer RNAs, four messenger RNAs and one ribosome (see below).

1. DNA, RNA structure. 2. DNA replication. 3. Transcription, translation

Protein Synthesis. Application Based Questions

Fishy Amino Acid Codon. UUU Phe UCU Ser UAU Tyr UGU Cys. UUC Phe UCC Ser UAC Tyr UGC Cys. UUA Leu UCA Ser UAA Stop UGA Stop

iclicker Question #28B - after lecture Shown below is a diagram of a typical eukaryotic gene which encodes a protein: start codon stop codon 2 3

The combination of a phosphate, sugar and a base forms a compound called a nucleotide.

Level 2 Biology, 2017

(a) Which enzyme(s) make 5' - 3' phosphodiester bonds? (c) Which enzyme(s) make single-strand breaks in DNA backbones?

DNA Begins the Process

Thr Gly Tyr. Gly Lys Asn

Degenerate Code. Translation. trna. The Code is Degenerate trna / Proofreading Ribosomes Translation Mechanism

Codon Bias with PRISM. 2IM24/25, Fall 2007

7.016 Problem Set 3. 1 st Pedigree

PROTEIN SYNTHESIS Study Guide

A Zero-Knowledge Based Introduction to Biology

Protein Synthesis: Transcription and Translation

Disease and selection in the human genome 3

Important points from last time

MULTIPLE CHOICE. Choose the one alternative that best completes the statement or answers the question.

Biomolecules: lecture 6

Just one nucleotide! Exploring the effects of random single nucleotide mutations

CONVERGENT EVOLUTION. Def n acquisition of some biological trait but different lineages

Enduring Understanding

ANCIENT BACTERIA? 250 million years later, scientists revive life forms

Biomolecules: lecture 6

Bioinformatics CSM17 Week 6: DNA, RNA and Proteins

INTRODUCTION TO THE MOLECULAR GENETICS OF THE COLOR MUTATIONS IN ROCK POCKET MICE

Chemistry 121 Winter 17

Folding simulation: self-organization of 4-helix bundle protein. yellow = helical turns

How life. constructs itself.

DNA RNA Protein Trait Protein Synthesis (Gene Expression) Notes Proteins (Review) Proteins make up all living materials

ORFs and genes. Please sit in row K or forward

Mutations. Mutations may be either gene mutations or. These mistakes are called. mutations. Gene mutations produce a change

Genes and Proteins. Objectives

Chapter 10. The Structure and Function of DNA. Lectures by Edward J. Zalisko

DNA.notebook March 08, DNA Overview

NAME:... MODEL ANSWER... STUDENT NUMBER:... Maximum marks: 50. Internal Examiner: Hugh Murrell, Computer Science, UKZN

TRANSCRIPTION. Renáta Schipp

MULTIPLE CHOICE. Choose the one alternative that best completes the statement or answers the question.

p-adic GENETIC CODE AND ULTRAMETRIC BIOINFORMATION

Describe the features of a gene which enable it to code for a particular protein.

Lecture 19A. DNA computing

Daily Agenda. Warm Up: Review. Translation Notes Protein Synthesis Practice. Redos

Honors packet Instructions

DNA sentences. How are proteins coded for by DNA? Materials. Teacher instructions. Student instructions. Reflection

UNIT I RNA AND TYPES R.KAVITHA,M.PHARM LECTURER DEPARTMENT OF PHARMACEUTICS SRM COLLEGE OF PHARMACY KATTANKULATUR

BIOSTAT516 Statistical Methods in Genetic Epidemiology Autumn 2005 Handout1, prepared by Kathleen Kerr and Stephanie Monks

Understanding Genes & Mutations. John A Phillips III May 16, 2005

Lecture 11: Gene Prediction

Mutations. Lecture 15

Project 07/111 Final Report October 31, Project Title: Cloning and expression of porcine complement C3d for enhanced vaccines

Chapter 13 From Genes to Proteins

Evolution of protein coding sequences

The Pieces Inside of You that Make You Who You Are. Genes and DNA

Homework. A bit about the nature of the atoms of interest. Project. The role of electronega<vity

Comparing RNA and DNA

Chapter 3: Information Storage and Transfer in Life

UNIT 7. DNA Structure, Replication, and Protein Synthesis

Assignment 13. In the Griffith experiment, why did mice die when injected with live R bacteria plus heatkilled

From DNA to Protein Structure and Function

Basic Biology. Gina Cannarozzi. 28th October Basic Biology. Gina. Introduction DNA. Proteins. Central Dogma.

Transcription & Translation Practice Examination

11 questions for a total of 120 points

Chapter 17. Gene Mutations and DNA Repair (Part 1) What does this tell us?

Human Gene,cs 06: Gene Expression. Diversity of cell types. How do cells become different? 9/19/11. neuron

THE GENETIC CODE Figure 1: The genetic code showing the codons and their respective amino acids

Deoxyribonucleic Acid DNA. Structure of DNA. Structure of DNA. Nucleotide. Nucleotides 5/13/2013

UNIT (12) MOLECULES OF LIFE: NUCLEIC ACIDS

Lecture for Wednesday. Dr. Prince BIOL 1408

UNIT 4. DNA, RNA, and Gene Expression

Basic concepts of molecular biology

Translating the Genetic Code. DANILO V. ROGAYAN JR. Faculty, Department of Natural Sciences

Station 1: DNA Structure Use the figure above to answer each of the following questions. 1.This is the subunit that DNA is composed of. 2.

DNA/RNA. Transcription and Translation

Lecture 10, 20/2/2002: The process of solution development - The CODEHOP strategy for automatic design of consensus-degenerate primers for PCR

Det matematisk-naturvitenskapelige fakultet

AGENDA for 02/07/14 AGENDA: HOMEWORK: Due end of period. Due Thurs, OBJECTIVES:

Protein Structure Analysis

Review of Central Dogma; Simple Mendelian Inheritance

INTEREST GRABBER NOTEBOOK

G+C content. 1 Introduction. 2 Chromosomes Topology & Counts. 3 Genome size. 4 Replichores and gene orientation. 5 Chirochores.

SAY IT WITH DNA: Protein Synthesis Activity by Larry Flammer

RNA and PROTEIN SYNTHESIS. Chapter 13

7.014 Quiz II 3/18/05. Write your name on this page and your initials on all the other pages in the space provided.

PGRP negatively regulates NOD-mediated cytokine production in rainbow trout liver cells

Q1. Lysozyme is an enzyme consisting of a single polypeptide chain of 129 amino acids.

7.014 Solution Set 4

National PHL TB DST Reference Center PSQ Reporting Language Table of Contents

Mechanisms of Genetics

Four different segments of a DNA molecule are represented below.

From DNA to Protein. Chapter 14

BIOL591: Introduction to Bioinformatics Comparative genomes to look for genes responsible for pathogenesis

The Genetic Code: Translation. Pre-class reading Chapter 17: Pages

CMPS 6630: Introduction to Computational Biology and Bioinformatics. Gene Prediction

Gene Eukaryotic Codons Transcription Nucleotides

for Programmed Chemo-enzymatic Synthesis of Antigenic Oligosaccharides

con t. Chapter 32 The Genetic Code Nature of the Genetic Code BCH 4054 Spring 2001 Chapter 32 Lecture Notes Slide 1 Slide 2

Lezione 10. Bioinformatica. Mauro Ceccanti e Alberto Paoluzzi

Transcription:

Worksheet: Mutations Practice There are three ways that DNA can be altered when a mutation (change in DNA sequence) occurs. 1. Substitution one base-pairs is replaced by another: Example: G to C or A to G C G T C 2. Insertion one or more base pairs is added to a sequence: Example: CGATGG CGAATGG GCTACC GCTTACC 3. Deletion one or more base pairs is lost from a sequence: Example: CGATGG CATGG GCTACC GTACC There are five possible results of a mutation. 1. Silent mutation: When a base pair is substituted but the change still codes for the same amino acid in the sequence: Example: TCT and TCC both code for the amino acid Serine 2. Substitution: When a base pair is substituted and the new codon codes for a different amino acid: Example: TCT codes for Serine and CCT codes for Proline 3. Premature Stop: When a substitution results in the formation of a STOP codon before all of the codons have been read and translated by the ribosome. Example: GTGGTCCGAAACACC GTGGTCTGAAACACC Val-Val-Pro-Asn-Thr Val-Val-STOP 4. Codon Deletion or Insertion: A whole new amino acid is added, or one is missing from the mutant proton: Example: GTGGTCCGAAACACC GTGGTCTGCCGAAACACC Val-Val-Pro-Asn-Thr Val-Val-Cys-Pro-Asn-Thr 5. Frame Shift: When a deletion or insertion results in a different base pait being the beginning of the next codon, changing the whole sequence of amino acids Example: GTGGTCCGAAACACCT GTGGTCGAAACACCT Val-Val-Pro-Asn-Thr Val-Val-Glu-Thr-Pro

1. Below is the base sequence for the normal protein for normal hemoglobin and the base sequence for the sickle cell hemoglobin. Normal: GGG CTT CTT TTT Sickle: GGG CAT CTT TTT a. Transcribe and translate the normal and sickle cell DNA. normal: mrna: CCC GAA GAA AAA normal Amino Acid: PRO GLU GLU LYS L GLU LYS sickle: mrna: CCC GUA GAA AAA sickle amino acid: PRO VA b. Identify this as a point or frameshift mutation. Explain. It is a point mutation of the misense kind: a single base substitution in the normal mrna caused a different amino acid to be added. c. If the base sequence read GGG CTT CTT AAA instead, would this result in sickle cell hemoglobin? Explain. mrna: CCC GAA GAA UUU Amino Acid: PRO GLU PHE GLU Yes. The "normal" amino acid "LYS" got replaced by "PHE"

2. There are several types of genetic mutations. List two. What do they have in common? How are they different? Give an example of each. frameshift and point mutations. They change the amino acid sequence of a protein. Frameshift mutations are deletions or insertions of bases, causing the mrna sequence to get longer or shorter. Point mutations: misense, silent, nonsense Frameshift mutations: insertion, deletion 3. A geneticist found that a particular mutation had no effect on the protein coded by a gene. What do you think is the most likely type of mutation in this gene? Why? A silent mutation. Because even thought the base sequence might have changed by a single base, the amino acid sequence and therefore the protein, did not change. 4. Name one amino acid that has more than one codon. Name an amino acid that has only one codon LEU has 6 codons. MET has only one codon 5. Look at the following sequence: THE FAT CAT ATE THE RAT. Delete the first H and regroup the letters in groups of three- write out the new groups of three. Does the sentence still make sense? What type of mutation is this an example of? TEF ATC ATA TET HER AT No. It's a deletion. You have a DNA sequence that codes for a protein and is 105 nucleotides long. A frameshift mutation occurs at the 85 th base- how many amino acids will be correct in this protein? 28. 84 divided by 3 (no. of bases coding for a single amino acid) equals 28. After the 85th base, all codons are messed 6. Given up. the following three mrna sequences, 2 code for the same protein. Which two? #1. AGU UUA GCA ACG AGA UCA SER LEU ALA THR ARG SER #2 UCG CUA GCG ACC AGU UCA SER LEU ALA THR SER SER #3 AGC CUC GCC ACU CGU AGU SER LEU ALA THR ARG SER Sequences #1 and #3 code for the same protein.

Original DNA Sequence: mrna Sequence: Amino Acid Sequence: T A C A C C T T G G C G A C G A C T Mutated DNA Sequence #1: T A C A T C T T G G C G A C G A C T Mutated DNA Sequence #2: T A C G A C C T T G G C G A C G A C T Mutated DNA Sequence #3: T A C A C C T T A G C G A C G A C T Mutated DNA Sequence #4: T A C A C C T T G G C G A C T A C T Mutated DNA Sequence #5: T A C A C C T T G G G A C G A C T What will be the corresponding mrna sequence?

1. Which type of mutation is responsible for new variations (alleles) of a trait? 2. Which type of mutation results in abnormal amino acid sequence? 3. Which type of mutation stops the translation of the mrna?