Knockdown of Arhgef-1 expression in VSMCs To knockdown rat VSMCs Arhgef-1 expression, three sets of sirna against rat

Similar documents
RNA oligonucleotides and 2 -O-methylated oligonucleotides were synthesized by. 5 AGACACAAACACCAUUGUCACACUCCACAGC; Rand-2 OMe,

1. Cross-linking and cell harvesting

Apoptosis And Anti-tumor Effect Induced By Mtor Inhibitor And Autophagy Inhibitor In Human Osteosarcoma Cells

Spironolactone ameliorates PIT1-dependent vascular osteoinduction in klotho-hypomorphic mice

Supplementary Figure 1. Co-localization of GLUT1 and DNAL4 in BeWo cells cultured

Data Sheet. TCR activator / PD-L1 - CHO Recombinant Cell line Cat. #: 60536

Gα 13 Activation Assay Kit

NTM486-04, NTM174-04,

8Br-cAMP was purchased from Sigma (St. Louis, MO). Silencer Negative Control sirna #1 and

Data Sheet PD-1 / NFAT - Reporter - Jurkat Recombinant Cell Line Catalog #: 60535

RNA was isolated using NucleoSpin RNA II (Macherey-Nagel, Bethlehem, PA) according to the

Supplementary data. sienigma. F-Enigma F-EnigmaSM. a-p53

Cdc42 Activation Assay Kit

Cell Lysis Kit Product Insert For use with Bio-Plex phosphoprotein assays and Bio-Plex total target assays. Bio-Plex TM

Establishing sirna assays in primary human peripheral blood lymphocytes

Fig. S1 TGF RI inhibitor SB effectively blocks phosphorylation of Smad2 induced by TGF. FET cells were treated with TGF in the presence of

Solid Phase cdna Synthesis Kit

Gα i Activation Assay Kit

Supplemental Information

Quantitative and non-quantitative RT-PCR. cdna was generated from 500ng RNA (iscript;

yields an amplicon between 80 and 200bp, spans exon-exon junctions, and has a melting point from 59-

Supplemental Table 1: Sequences of real time PCR primers. Primers were intronspanning

Alt-R CRISPR-Cpf1 System:

QuickExtract RNA Extraction Kit

Plasmid DNA transfection of SW480 human colorectal cancer cells with the Biontex K2 Transfection System

Nature Medicine: doi: /nm.2171

Rab5 Activation Assay Kit

Plasmid DNA transfection of LN-229 human glioblastoma cells with the Biontex K2 Transfection System

Data Sheet. Hedgehog Signaling Pathway Gli Reporter NIH3T3 Cell Line Catalog #: 60409

OPPF-UK Standard Protocols: Mammalian Expression

Supplementary Table 1. PCR amplification conditions for each primer pair. Primer sequence

LINGO-1, A TRANSMEMBRANE SIGNALING PROTEIN, INHIBITS OLIGODENDROCYTE DIFFERENTIATION AND MYELINATION THROUGH INTERCELLULAR SELF- INTERACTIONS.

Transfection Reagent SPECIFICATIONS MATERIALS. For Research Use Only. Materials Supplied. Materials required, but not supplied

RheB Activation Assay Kit

sirna Transfection Into Primary Neurons Using Fuse-It-siRNA

Data Sheet. Hedgehog Signaling Pathway Gli Reporter NIH3T3 Cell Line Catalog #: 60409

IgG TrueBlot Protocol for Mouse, Rabbit or Goatderived Antibodies - For Research Use Only

Immunoprecipitation Protocol

Transfection of CRISPR/Cas9 Nuclease NLS ribonucleoprotein (RNP) into adherent mammalian cells using Lipofectamine RNAiMAX

Data Sheet. Glucocorticoid Receptor Pathway GR-GAL4 Reporter (Luc)-HEK293 cell Line Catalog #: 60655

Arf6 Activation Assay Kit

Transfection Reagent Protocol for MIR 2110, 2114, 2115, 2116

B. ADM: C. D. Apoptosis: 1.68% 2.99% 1.31% Figure.S1,Li et al. number. invaded cells. HuH7 BxPC-3 DLD-1.

High Pure RNA Isolation Kit for isolation of total RNA from 50 samples Cat. No

MeCP2. MeCP2/α-tubulin. GFP mir1-1 mir132

Segments of the obstructed intestinal loops were fixed in 4% paraformaldehyde

SANTA CRUZ BIOTECHNOLOGY, INC.

Data Sheet. Glucocorticoid Receptor Pathway GAL4 Reporter (Luc)-HEK293 cell Line Catalog #: w70666

SUPPLEMENTAL MATERIALS SIRTUIN 1 PROMOTES HYPEROXIA-INDUCED LUNG EPITHELIAL DEATH INDEPENDENT OF NRF2 ACTIVATION

Adult Neuron Isolation Protocol (R. Kaletsky 9/2014)

Heparan Sulphate in Breast Cancer Low, Y.L.A 1 and Yip, C.W.G 2

Antibody was principally purchased from Santa Cruz (EGFR sc-03), Cetuximab (Bristol

Table 1. Primers, annealing temperatures, and product sizes for PCR amplification.

supplementary information

Yeast Nuclei Isolation Kit

Amaxa Cell Line Nucleofector Kit L

Data Sheet CD137/NF-κB Reporter - HEK293 Recombinant Cell Line Catalog # 79289

RNAsimple Total RNA Kit

QuantiSir General Gene Knockdown Quantification Kit

EPIGENTEK. EpiQuik Tissue Chromatin Immunoprecipitation Kit. Base Catalog # P-2003 PLEASE READ THIS ENTIRE USER GUIDE BEFORE USE

Novel Role of Protein Kinase C Delta Tyr 311 Phosphorylation in Vascular Smooth Muscle Cell Hypertrophy by Angiotensin II

Anti-HB-EGF (Human) mab

For simultaneous purification of genomic DNA and total RNA from the same animal cells or tissues

Supplemental Materials and Methods

Protocol CRISPR Genome Editing In Cell Lines

Supporting Information

Supplementary Information (Ha, et. al) Supplementary Figures Supplementary Fig. S1

Protein and transcriptome quantitation using BD AbSeq Antibody-Oligonucleotide

RNA Blue REAGENT FOR RAPID ISOLATION OF PURE AND INTACT RNA (Cat. No. R011, R012, R013)

Supplementary Information Temperature-responsive Gene Silencing by a Smart Polymer

Data Sheet. MAPK/ERK Signaling Pathway SRE Reporter HEK293 Cell Line Catalog #: 60406

Supplementary information to accompany: A novel role for the DNA repair gene Rad51 in Netrin-1 signalling

DNA Isolation Reagent for Genomic DNA

Supplementary material and methods

Smooth Muscle-Specific Expression of ipla 2 β Participates in the Initiation and Early Progression of Vascular Inflammation and Neointima Formation

TransIT-TKO Transfection Reagent

SideStep Lysis and Stabilization Buffer

Data Sheet GITR / NF-ĸB-Luciferase Reporter (Luc) - Jurkat Cell Line Catalog #60546

RhoC Activation Assay Kit

A Supersandwich Fluorescence in Situ Hybridization (SFISH) Strategy. for Highly Sensitive and Selective mrna Imaging in Tumor Cells

STANDARD OPERATING PROCEDURE

Arrest-In Transfection Reagent Catalog numbers: ATR1740, ATR1741, ATR1742, ATR1743

Anti-Pim-1 (Cat#3247), anti-met (Cat#3127), anti-ron (Cat#2654), Anti-EGFR

Page 1 of 5. Product Name Label Quantity Product No. Cy 3 10 µg (~0.75 nmol) MIR Cy µg (~7.5 nmol) MIR 7901

Total Arrest RNA. For Isolation of DNA free RNA for RT PCR. (Cat. # , ) think proteins! think G-Biosciences

XIT Genomic DNA from Cells

TaKaRa MiniBEST Universal RNA Extraction Kit

1. QUANTITY OF LYSATE 2. LYSIS BUFFER

EZ-Zyme Chromatin Prep Kit

ab Ran Activation Assay Kit

Transcriptional regulation of BRCA1 expression by a metabolic switch: Di, Fernandez, De Siervi, Longo, and Gardner. H3K4Me3

used at a final concentration of 5 ng/ml. Rabbit anti-bim and mouse anti-mkp2 antibodies were

MeDIP-seq library construction protocol v2 Costello Lab June Notes:

Note: for laboratory research use only. RNA High-purity Total RNA Rapid Extraction Kit (Spin-column) Signalway Biotechnology

HOOK 6X His Protein Spin Purification (Bacteria)

Androgen Receptor (Phospho-Tyr363) Colorimetric Cell-Based ELISA Kit. Catalog #: OKAG02138

HeLa cells stably transfected with an empty pcdna3 vector (HeLa Neo) or with a plasmid

Transcription:

Supplemental Material Chemicals and Reagents PGE2 and sulprostone were respectively purchased from Cayman Chemical (Ann Arbor, MI) and BioMol Research Laboratories (Plymouth Meeting, PA). M&B28767 was generously provided by M. Caton (Rhone-Poulenc Rorer, Dagenham, United Kingdom). The EP3 antagonist DG-041 was synthesized by the Vanderbilt Institute of Chemical Biology Chemical Synthesis Core. Cell culture media and all other related chemicals were purchased from Invitrogen (Carlsbad, CA). Ang II, phenylephrine (PE), sodium nitroprusside (SNP) and L798106 were obtained from Sigma-Aldrich (St. Louis, MO). Analysis of Wild-type and Targeted EP3 Alleles EP3+/+ and EP3-/- mice were kindly gifted by Dr. Richard M. Breyer. PCR-based strategies were used for genotyping wild-type and EP3 mutant alleles. Two pairs of primers were used to amplify a 152bp and 721bp genomic DNA fragment sparing the mutant site for wild type and EP3-/- mice, respectively (Fig. S1). The sequences of the primers were listed in table S1. PCR reactions were carried out at 94 C for 30 seconds and 58 C for 30 seconds then 72 C for 30 seconds for 35 cycles for both wild-type and EP3 alleles. PCR products were separated on 1% agrose gel. Primary Culture of VSMCs VSMCs from Sprague-Dawley rats were cultured as previously reported 1. The thoracic aorta was dissected, vessels were cleared of fat in Dulbecco s modified Eagle s medium (DMEM), cut into 1- to 2-mm pieces and digested with collagenase in DMEM at 37 C overnight. The cell suspension was centrifuged at 1000 xg for 10 min, and the pellet was resuspended in DMEM containing 10% heat-inactivated fetal calf serum (FCS), 2 mmol/l L-glutamine, 100 U/ml penicillin, and 100 U/ml streptomycin. The dispersed cells were incubated at 37 C in a humidified 5% CO2/95% air atmosphere. Cells were subcultured in tissue culture dishes (100 mm diameter) containing 19 mm diameter type 0 glass coverslips, and the cells were grown to confluence. All studies were performed with cells between 6 and 12 passages. Six to twelve hours before the experiment, media was replaced with serum-free DMEM. On the day of the experiment, subconfluent cells were washed once with culture media and reincubated with fresh media containing sulprostone (1μmol/L, 10μmol/L) or DG-041 (0.1μmol/L, 1μmol/L, and 10μmol/L) for 30 mins. Knockdown of Arhgef-1 expression in VSMCs To knockdown rat VSMCs Arhgef-1 expression, three sets of sirna against rat

Arhgef-1 cdna coding sequence and a negative control (scramble) sirna were synthesized by GenePharma Co., Ltd (No. 2723: sense, 5 GCCUAGAAGUGGUCAUCAATT 3, antisense, 5 UUGAUGACCACUUCUAGGCTT 3 ; No. 1619: sense, 5 GCUCAUGGUUCCAGAAGAUTT 3, antisense, 5 AUCUUCUGGAACCAUGAGCTT 3 ; No. 704: sense, 5 CCACCUAGAGGAAAUGCAATT 3, antisense, 5 UUGCAUUUCCUCUAGGUGGTT 3 ). Transfections of sirnas to VSMC were carried out with Lipofectamine 2000 as per manufacturer s instruction. In brief, cells were plated the day before transfection at a concentration of 5x105 cells per well in 6-well plates. The following day, cells were transfected with 40nM sirna and incubated for additional 36h prior to harvesting. The mrna and protein level of Arhgef-1 were monitored by Real-time PCR and Western blot, respectively. RNA Extraction and Real-time PCR Mesenteric artery segments and kidneys were quickly dissected and snap-frozen in liquid nitrogen. Vascular tissues were pooled from 3 animlas and total RNA was extracted by using Trizol reagent (Life Technologies). VSMCs were washed twice with PBS and 1ml Triol reagent were added into one well. Then the cells were scraped from well and pipetted into 1.5 ml EP tube. Total RNA was reverse-transcribed to cdna by the use of RevertAidTM first strand cdna synthesis kit (Fermentas) according to the manufacturer s protocol. Real-time PCR was performed with the use of icycler with the SYBR Green I probe (Bio-rad, Hercules, CA). Each sample was analyzed in triplicate and normalized to the level of β-actin mrna. The PCR protocol was 95 C for 30 seconds, 59 C to 60 C for 30 seconds, and 72 C for 30 seconds, for 40 cycles, followed by a final extension at 72 C for 7 minutes. The primer sequences were listed in Supplemental Table S1. PCR products were validated by electrophoresis on 1.5% agrose gel. MLC20 and MYPT1 Phosphorylation in Porcine Coronary Arteries Left circumflex coronary arteries and left anterior descending coronary arteries of domestic pigs (4 months old, either sex) were obtained within 30 min of death from the local slaughterhouse in ice-cold oxygenated modified Krebs Ringer bicarbonate solution. Arteries with external diameter ranging from 1.7 to 2.5 mm were dissected in ice-cold control buffer and used in the study. Vessel rings were incubated for 30 min in the presence of solvent or DG041 (1μmol/L) after equilibrated in serum-free Dulbecco s modified Eagle s medium for 30min at 37 C. Nitro-L-arginine (100μmol/L) was included in the medium. Then vessel rings were rapidly taken out and snappy frozen with liquid nitrogen immediately after stimulated by AngII

(1μmol/L) for 5min. Tissue lysates prepared from the frozen vessels, each containing 20μg of protein, were subjected to SDS PAGE and then transferred to PVDF membrane. Non-specific binding of antibody was blocked by washing with TBS buffer containing 10% milk for 1 h. The blots were then incubated with the primary antibody of phospho-mlc20 (1:1000 dilution), MLC20 (1:1000 dilution), MYPT1 (1:1000 dilution) or pmypt1 (Thr696) (1:500 dilution) overnight and then the secondary antibody for 1h. The blots were visualized using the chemiluminescent detection method (Pierce). The levels of proteins present on the blots were quantified by densitometry using ImageJ (NIH) and normalized to the signals of β-actin (1:4000).

Supplemental Reference: 1. Gopalakrishnan V, Xu YJ, Sulakhe PV, Triggle CR, McNeill JR. Vasopressin (V1) receptor characteristics in rat aortic smooth muscle cells. Am J Physiol. 1991;261:H1927-1936.

Supplemental Figure Legends Supplemental Figure I. Genotyping and validation of EP3-/- mice. PCR genotyping of EP3+/+ and EP3-/- mice. Two pairs of primers were used for genotyping wild-type (152bp) and EP3-/- (721bp) alleles, respectively. B) RT-PCR analysis of mouse EP3α, EP3β, and EP3γ mrna expression. Total RNA from kidneys and mesenteric arteries of wild type mice were used to detect EP3α, EP3β, and EP3γ variants and β-actin served as the loading control. C) RT-PCR analysis of EP3 mrna and its subtype levels from kidneys of EP3+/+ and EP3-/- mice. D) Absence of the EP3 protein in the kidneys of EP3-/- mice, β-actin was used as the loading control. Supplemental Figure II. Arhgef-1 protein expression and MLC20 and MYPT1 phosphorylation in EP3+/+ and EP3-/- mesenteric arteries. Western blot analysis of Arhgef-1 protein expression in EP3+/+ and EP3-/- mesenteric arteries pooled from 3 animals in each group. EP3-/- mesenteric arteries showed markedly reduced Arhgef-1 protein expression. B) Western blot analysis of MLC and MYPT1 phosphorylation in EP3+/+ and EP3-/- mesenteric arteries pooled from 3 animals in each group with or without 5-min pretreatment of AngII (1μmol/L). AngII enhanced the phosphorylation of both MLC and MYPT1 in EP3+/+ mice, while a lack of EP3 diminished the effect. β-actin was used as the loading control. Supplemental Figure III. Validation of Arhgef-1 antibody. Rat VSMCs were transfected with three sets of Arhgef-1 sirna (No. 2723, No. 1619 and No. 704) with the scramble sirna as a control. Western blot (A) or Real-time PCR (B) was used to determine the protein and mrna expression levels of Arhgef-1. A) Suppression of Arhgef-1 protein expression by three sets of Arhgef-1 sirna. β-actin was used as the loading control. B) Arhgef-1 sirnas reduced Arhgef-1 mrna levels by 50%, with little effect on Arhgef-11 and Arhgef-12 expression. **P<0.01, sirna vs. scramble. n=4 in each group. Supplemental Figure IV. Effect of the EP3 receptor antagonist on AngII-induced MLC20 and MYPT1 phosphorylation in porcine coronary arteries. The rings of porcine coronary arteries were stimulated by AngII (1μmol/L) for 5minutes after preincubated in DG041 (10μmol/L) for 30minutes. DG041 markedly inhibited AngII-induced phosphorylation of MLC20 and MYPT1. *P<0.05, **P<0.01, Control group vs. AngII alone; # P<0.05, ### P<0.001, AngII+DG041 vs. AngII alone. n=3 in each group. Supplemental Figure V. Effect of sulprostone and DG041treatment on intracellular Ca2+ levels in VSMCs. A) Compared with AngII (1 ), sulprostone alone only slightly increased intracellular Ca2+ levels. ***P<0.001, 10μmol/L sulprostone vs. 1μmol/L sulprostone.

n=10 in each group. B) Pretreatment of VSMCs with DG041 (10μmol/L) had little effect on phenylephrine (1 )-induced calcium signal. n=15 in each group. Supplemental Figure VI. The role of the EP3 receptor in AngII-induced vasoconstriction. AngII evokes vasopressor response through both Gq/Ca2+/calmodulin-dependent activation of MLCK and G12/13/Arhger-1/RhoA/Rho Kinase-mediated phosphorylation of MYPT1. By modulating the levels of Ca2+, Arhgef-1 and phosphorylation of MYPT1/MLC, the EP3 receptor synergistically acts with AngII to contract VSMCs via Ca2+ signaling and Ca2+ sensitivity pathways.

Supplemental Figure I.

Supplemental Figure II.

Supplemental Figure III.

Supplemental Figure IV.

Supplemental Figure V.

Supplemental Figure VI.

Supplemental Table I. Sequence of primers for genotyping and RT-PCR analysis For Genotyping Name EP3+/+ EP3-/- Sequence Sense: 5 GCTGTCTCCAGTTGTCTA 3 Anti-sense: 5 TGCCTCAGTCCATAAGGGTTAGGG 3 Sense: 5 TGGCACAGAAAGGATTATCTA 3 Anti-sense: 5 AACGCTTGTCAAATGTTCAT 3 Product length(bp) 152 721 For RT-PCR Name NCBI No. EP3 NM_011196.2 D10204.1 NM_011196.2 EP3γ D17406.1 Arhgef-1 NM_021694.3 Arhgef-11 NM_023982.1 Arhgef-12 NM_001013246.1 β-actin NM_007393 Sequence Sense: 5 ATCCTCGTGTACCTGTCACAGCGACGCTGG 3 Anti- Sense: 5 GCTGTCCGTCTGTTGGTC 3 Anti-sense: 5 GGAGCTGGAAGCATAGTTG 3 Sense: 5 GGAAGTTCTGCCAGATGAT 3 Anti-sense: 5 GGTTCTGAGGCTGGAGATA 3 Sense: 5 AACGCTGTCTCCAGTTGC 3 Anti-sense: 5 TGTGGCTTCATTCCTTGC 3 Sense: 5 GCCCCAAAGAAGCCAAGAA 3 Anti-sense: 5 ACCTCTTGTATGAACCGCCTCT 3 Sense: 5 GGGACCCTCTTCGAGAACGCCAAA 3 Anti-sense: 5 GGGCAGCCACTTGTCCTTGTCAGG 3 Sense: 5 GCATGGAAGTATTTTGAACCGA 3 Anti-sense: 5 CCCGAATCCATTGTCATCTTT 3 Sense: 5 AGCCATGTACGTAGCCATCC 3 Anti-sense: 5 GCTGTGGTGGTGAAGCTGTA 3 Product length(bp) 611 241 307 451 163 209 193 222