Statistical modelling (upscaling) of Gross Primary Production (GPP)

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1 Statistical modelling (upscaling) of Gross Primary Production (GPP) Martin Jung Max Planck Institute of Biogeochemistry, Jena, Germany Department of Biogeochemical Integration jena.mpg.de

2 Motivation Substantial uncertainty of GPP simulations of Land Surface / Terrestrial Ecosytem Models Independent, complementary, more observation based data stream with least assumptions about ecosystem functioning Improved diagnostics, cross consistency checks, LSM evaluations Huntzinger et al 2012

3 FLUXNET: a network of network of eddy covariance sites Fluxnet Canada Carboeurope/NECC TCOS Ameriflux LBA Chinaflux USCCC Asiaflux KoFlux CarboAfrica Afriflux Ozflux

4 FLUXNET gridded products rationale: (Direct) observations Empirical models Remote sensing models (CASA, MOD17) Offline DGVM (Free-running) C 4 -models Assumptions about system Observational input be as much as possible on observational side!

5 From point to globe via integration with remote sensing century Gridded Forest/soil inventories decade year Tree rings Landsurface remote sensing Temporal scale month week day Eddy covariance towers tall tower observatories remote sensing of CO 2 hour local global plot/site Countries Spatial scale [km] EU

6 General Principle The same gridded explanatory variables Site-level explanatory variables Meteorology Vegetation type Remote sensing indices f Application Gridded target variable Target variable ecosystematmosphere flux

7

8 Proof of concept

9 FLUXNET representativeness

10 Upscaling strategy using a model tree ensemble (MTE) A Model TREE Advantages: Functional stratification Intuitive Can cope with switches Seemless integration of categorical variables Jung et al. (2009) BG

11 Mimicking a process model (LPJmL) FLUXNET database Site level Quality control Extracting simulated GPP & model forcing data at locations & times 3550 sitemonths from 178 sites Train Model Tree Ensemble 25 trees, R 2 = Global scale Apply MTE global Compare to LPJmL simulation R 2 = 0.92 Jung et al. (2009) BG

12 Mimicking a process model (LPJmL) = observed =emprically upscaled Jung et al. (2009) BG

13 The value of ensemble magic

14 Moving to upscaling with real world observations

15 Comparison of two flux partitioning methods Lasslop et al 2010

16 Uncertainty due to u* filtering GPP_ust_range_full [gc m-2 year-1] Reichstein et al in prep

17 Quality control Remove data points with more than 20% of gapfilling Remove outliers from the comparison of Reichstein vs Lasslop flux partitioning methods (monthly data) Remove 5% of data that show largest uncertainty due to u* filtering (monthly data)

18 Inputs

19 Cross validation results Site 1 Site 2 Site 3 Site 4 Site 5 time data data from from EACH entire SITE sites were were partitioned left into out 5 parts

20 Possible reasons why anomalies are (apparently) predicted poorly low signal to noise ratio of monthly anomalies of eddy covariance data Large noise in site level remote sensing data Substantial non climatically caused anomalies in FLUXNET data (e.g. management, disturbances, manipulations) Anomalies due to ecophysiological variations that change the sensitivity to meteo and biophysical properties

21 Global Results

22

23

24

25

26 Patterns of Seasonality Amplitude of mean seasonal cycle Max of mean seasonal cycle

27 Hot spots of interannual variability

28 Towards improving

29 The 4 principal dimensions Regression Algorithm Where is the bottleneck? Data quality Data quantity Injected Information

30 Sandbox analysis I: Do we use a suitable algorithm?

31 Sandbox analysis II: Are we limited by the number of sites? A monte carlo test with Random Forests

32 Remote sensing data quality issues Aerial photo Landsat 1 km MODIS

33 Towards a coordinated set of experiments and intercomparisons:

34 Concrete FLUXCOM goals To deliver a best estimate ensemble product of carbon and energy fluxes from an ensemble of diverse data oriented and FLUXNET based approaches. To study and if possible quantify sources of uncertainty which hopefully leads to improved strategies with reduced uncertainty along the way of the FLUXCOM activity. To come up with a practice guidance regarding regionalization of FLUXNET data.

35 The FLUXCOMP vision Analysis and intercomparison of global results Consistent cross validation & model selection Approaches M1 M2 M1 M2 M1 M2 M1 M2 Data base of explanatory variables Participants P1 P2 P3 P4

36 Current Participants Name Method/Model Approach Kazuhito Ichii SVM Machine Learning Dario Papale ANN Machine Learning Antje Moffat ANN Machine Learning Gustavo Camps Valls ANN Machine Learning Christopher Schwalm ANN Machine Learning Martin Jung MTE, RF Machine Learning Enrico Tomelleri MOD17+ Model Data Fusion Nuno Carvalhais CASA Model Data Fusion Timothy Hilton VPRM Model Data Fusion Anthony Bloom DALEC Model Data Fusion

37 Some quick pre FLUXCOM comparison (fully unharmonized) SVM (Kazuhito Ichii) ANN ensembles (Dario Papale) MTE (Martin Jung) MOD17+ (Enrico Tomelleri)

38 gc m -2 y -1 GPP Mean annual fluxes

39 gc m -2 d -1 Mean Seasonal cycles

40 FLUXCOM products will capitalize on: An ensemble (of ensembles ) of estimates Higher temporal and spatial resolution More injected information (variables) ~twice the amount of La Thuille FLUXNET data

41 The 4 principal dimensions Regression Algorithm Data quality Data quantity Injected Information

42 Which and how many variables are needed? Injected Information = f(availability, imagination) potentially large set feature selection problem Consider some trade offs Climate variables Satellite variables Precise in situ measurements No product switch necessary from site to globe High res global output possible Need coarse resolution climate data for global upscaling Uncertainty and biases of global climate fields Very noisy at site level Tower satellite footprint mismatch gaps

43 Some experiments with a feature selection algorithm and Random Forests? # candidate # selected variables CLIM+SAT CLIM+SAT (ANO) SAT CLIM 61 7

44 Results based on 10 fold crossvalidation and bootsrapping

45 On the evaluation of the products Site level cross validation is important and valuable to compare different approaches and set ups but Is a not sufficient evaluation of global fields because: Biased sampling of biosphere by tower sites Noise and site specific peculiarities at site level Doesn t capture uncertainties of global drivers Need for an independent, observational based approach Fluorescence

46 If photosynthesis is so complicated why can we get the big picture of gpp relatively easily from sparse data? - Adaptation to the environment - At ecosystem scale everything scales with LAI/FPAR What is the added value of fluoresence? Does it track physiological regulations that control interannual variability?

47 Thank you very much for your attention!

48 gc m -2 d -1 Interannual variability

49 Conclusions Global upscaling from FLUXNET is feasible A new observation driven data stream Known issues: Spatial distribution of mean NEE Underestimation of interannual variability Largest potential for future improvements: adding informative variables Plan of a coordinated intercomparison (FLUXCOMP) Global products are available on request

50 GPP

51 Uncertainties of empirical upscaling In situ data (FLUXNET) Global gridded datasets Empirical model/ Upscaling tool Quality control: Gap filling u* uncertainty Consistency of flux partitionings Consistency of energy budget Avoiding problematic variables (e.g. VPD) Identify & use good quality products sensitivity studies with various forcings use various approaches ensemble methods artificial experiments

52 GPP anomaly snapshots (gc m -2 mo -1 ) Jung et al. in prep 52

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