Implementation of the

Transcription

1 Implementatin f the Presentatin Title Ges Here multilateral presentatin system subtitle. by IRRI Ruaraidh Sackville Hamiltn T.T. Chang Genetic Resurces Centre, Internatinal Rice Research Institute, Ls Bañs, Laguna, Philippines

2 Outline What we d because we have t, and what we d because we chse t Germplasm scpe Germplasm tracking Prviding data Implicatins fr data management Identifying the status f germplasm under the MLS IT cnsultatin meeting 2-3 Dec

3 Germplasm distributin t CPs: bligatins In Trust germplasm Treaty article 15: facilitate access thrugh SMTA As lng as we cnserve, facilitate access thrugh SMTA Cmply with SMTA article 5 as prvider Prvide t recipients that cmply with SMTA article 6 Material received after 1 Jan 2007 with SMTA Cmply with SMTA article 6 as recipient If we cnserve, facilitate access thrugh SMTA Material derived frm material received after 1 Jan 2007 with SMTA Cmply with SMTA article 6 If we distribute, use SMTA: PGRFA under develpment IT cnsultatin meeting 2-3 Dec

4 Material nt under the Treaty Material acquired befre 1 Jan 2007, nt held in trust Material acquired after 1 Jan 2007, nt with SMTA Material develped by IRRI and/r partners, nt held in trust and nt develped frm material received with SMTA IT cnsultatin meeting 2-3 Dec

5 Germplasm held at IRRI ? In trust Other material received befre 2007 Material received with SMTA IRRI-bred lines 0 IT cnsultatin meeting 2-3 Dec

6 IRRI s imprved lines nt develped frm material received with SMTA Cnventinal implementatin f Treaty: distribute withut SMTA Nt under MLS Because nt in trust Nt PGRFA under develpment sensu SMTA Because nt derived frm Material received with SMTA Same fr PGRFA derived frm future transfers frm genebank t breeder Because n SMTA fr internal transfers 99.9% derived frm in trust germplasm Nt in spirit f Treaty t distribute withut SMTA Cmplex admin multiple MTAs, gradual transitin IT cnsultatin meeting 2-3 Dec

7 IRRI s PGRFA under develpment: IRRI s chice Vluntarily retractive: In trust germplasm subject t SMTA article 6 Derived materials = PGRFA under develpment sensu SMTA Vluntarily use SMTA fr breeding lines with n identifiable MLS ancestrs qualify as MLS ancestrs f future PGRFA under develpment Cmplies with spirit f Treaty Simple admin: 1 MTA, n gradual transitin IT cnsultatin meeting 2-3 Dec

8 INGER germplasm INGER = sets f elite lines cntributed by IRRI breeders and NARES partners Members a mixture f Party Under the jurisdictin f Party Frm nn-party cuntries Centralised in INGER HQ (IRRI), redistributed t partners INGER s agreed chice: SMTA t be used fr all INGER germplasm shipments T IRRI and frm IRRI T/Frm Party and nn-party As PGRFA under develpment if material has MLS ancestrs Otherwise as regular MLS germplasm IT cnsultatin meeting 2-3 Dec

9 Tracking germplasm SMTA Art 5a) Prvider undertakes that access shall be accrded withut the need t track individual accessins Recipient must knw Which accessins received with SMTA 6.1, 6.2, 6.3, 6.4, 6.5, 6.9 Which accessins received with SMTA / 6.11 Annex 3 para 3 Which PGRFA under develpment have been derived frm each accessin received (6.5b) Which prducts have been derived frm at least ne accessin received with SMTA (6.7, 6.8, 6.10, 6.11) Track use! IT cnsultatin meeting 2-3 Dec

10 Obligatins and chices presentatin fr prviding subtitle. access t data Presentatin Title Ges Here

11 Making available data: bligatins nt reslved SMTA Art. 5(e) The Prvider shall peridically infrm the Gverning Bdy abut the Material Transfer Agreements entered int, accrding t a schedule t be established by the Gverning Bdy N guidance SMTA Art. 6.9 The Recipient shall make available t the Multilateral System, thrugh the infrmatin system prvided fr in Article 17 f the Treaty, all nn-cnfidential infrmatin that results frm research and develpment carried ut n the Material N guidance IT cnsultatin meeting 2-3 Dec

12 Making available data: bligatins met SMTA Art. 5(b) The prvider must make available all passprt data and any ther assciated available nn-cnfidential descriptive infrmatin SMTA Art 6.5(a) In the case that the Recipient transfers a PGRFA under Develpment the Recipient shall identify, in Annex 1 the Material received frm the Multilateral System SMTA Annex 1 This Annex cntains a list f the Material prvided under this Agreement, including the assciated infrmatin referred t in Article 5b. This infrmatin is either prvided belw r can be btained at the fllwing website: (URL) IT cnsultatin meeting 2-3 Dec

13 Making available data: Questins and IRRI s answers (A) What ges in Annex 1? Minimum bligatry list f the Material MLS ancestrs f PGRFA under develpment IRRI s chice: include nly the minimum required In the frmat Unique ID (preferred name) With URL fr assciated infrmatin What ges in the URL? All passprt data and ther assciated available nn-cnfidential descriptive infrmatin that is nt in annex 1 IT cnsultatin meeting 2-3 Dec

14 Making available data: Questins and IRRI s answers (B) T whm shuld the infrmatin be made available? N guidance IRRI s chice: Make all infrmatin available ver public URL Hw shuld the infrmatin be made available? N guidance IRRI s chice: Assemble all data n the Material in each cnsignment at a URL specific t the cnsignment S the user desn t have t search thrugh the main database IT cnsultatin meeting 2-3 Dec

15 Making available the infrmatin An example: SMTA Data &page=1&pageSize=1000&methd=listEntriesData& smtaid=smta IT cnsultatin meeting 2-3 Dec

16 Implicatins Presentatin fr data Title management Ges Here presentatin subtitle.

17 Genebank s view f passprt data: MCPD Genebank accessin Dnr Origin What? Wh? Where? When? (Hw=acquired frm dnr) What? Wh? Where? When? (Hw=acquired directly r indirectly frm rigin) What? Wh? Where? When? Hw? IT cnsultatin meeting 2-3 Dec

18 Breeder s view f MCPD Originating frm What? Wh? Genebank accessin Where? When? Acquired by dnatin frm What? Wh? Dnr s sample Where? When? Original material (cllectin r crss) What? Wh? Where? When? IT cnsultatin meeting 2-3 Dec

19 Breeder s selectins Originating frm Selectin Selectin Selected frm What? Wh? Where? When? What? Wh? Where? When? Crss What? Wh? Where? When? IT cnsultatin meeting 2-3 Dec

20 Breeder s crss Crss Parent Parent IT cnsultatin meeting 2-3 Dec

21 Managing duplicates Cllectin E Cllectin D Cllectin C Cllectin B Cllectin A Cllected sample IT cnsultatin meeting 2-3 Dec

22 Additinal data fr IP management: IP Attributes attached t GIDs affected Usage subject t cntractual cnditins? Reference t dcuments Summary nte: Incming SMTA Redistributin prhibited Redistributin with restrictins Pass-thrugh cnditins Date incrprated int MLS In trust germplasm Pre-2007 material with retractive permissin frm prvider Pst-2007 material received with SMTA IT cnsultatin meeting 2-3 Dec

23 IT aspects f implementatin Field GID METHN GNPGS GPID1 GPID2 GDATE GLOCN MLS attribute IP attribute Cntent Internal ID fr a germplasm sample Hw was it created? Imprted, selected, crssed Number f parents (-1 if selected r maintained) Mther; r riginal crss r cllected sample Father; r dnr r immediate single parent Date GID created Lcatin where sample was created / is managed Date incrprated int MLS Reference t any ther IP restrictins IT cnsultatin meeting 2-3 Dec

24 Decisin wrkflw fr MLS status Germplasm sample recrded in database Marked MLS? distribute with SMTA N: marked nt available with SMTA? dn t use SMTA N: trace pedigree step 1 Trace pedigree step 1: single-parent descent (maintaining gentype r selecting subset) t mst recent crss: Marked MLS r nt available with SMTA? status f sample = status f parent N: nn-irri? cnsult prvider N: trace pedigree step 2 Trace pedigree step 2: walk whle pedigree checking every ancestr fr: Marked unavailable with pass-thrugh t derivatives dn t distribute sample Marked MLS? sample = PGRFA under develpment with MLS ancestr N ancestrs as abve: distribute as nrmal MLS IT cnsultatin meeting 2-3 Dec

25 MLS algrithm result: 3 lists fr SMTA annex 1 1. MLS germplasm In trust accessins Material received with SMTA Pre-2007 receipt marked MLS by prvider Pre-2007 IRRI material vluntarily marked MLS Pre-2007 IRRI material withut MLS ancestrs 2. PGRFA under develpment IRRI r INGER material with 1 MLS ancestr 3. MLS ancestrs f PGRFA under develpment IT cnsultatin meeting 2-3 Dec